RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 S100A16Q96FQ6 103 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF285Q96NJ3 590 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 MCHR1Q99705 422 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 TAS2R8Q9NYW2 309 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ST6GALNAC2Q9UJ37 374 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 MKL2Q9ULH7 1088 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ZMIZ1Q9ULJ6 1067 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 PCDHB10Q9UN67 800 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 C5orf52A6NGY3 159 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 PYCARD-AS1I3L0S3 204 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 FGF17O60258 216 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 THY1P04216 161 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 ADCYAP1P18509 176 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 GCGRP47871 477 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 PTH2RP49190 550 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 CENPAP49450 140 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 P2RX1P51575 399 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 FZD2Q14332 565 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 PLBD1Q6P4A8 553 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 DNM1P46Q6ZS02 220 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 GDF7Q7Z4P5 450 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 NKAIN4Q8IVV8 208 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 CSNK1A1LQ8N752 337 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 OR5T3Q8NGG3 340 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 DOK4Q8TEW6 326 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 TNFAIP8L1Q8WVP5 186 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 KISS1RQ969F8 398 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEM41AQ96HV5 264 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 SDF2Q99470 211 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 ORAI3Q9BRQ5 295 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 SEC11CQ9BY50 192 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC22A11Q9NSA0 550 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 CYP8B1Q9UNU6 501 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 SPACA6W5XKT8 324 aa12.73□□□□□ -0.37
RABGGTA-220ENST00000560998 A0A087WV62 115 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SPTY2D1-AS1A0A0U1RR47 76 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 MEX3AA1L020 520 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 OGG1O15527 345 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 LDB3O75112 727 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 GPR75O95800 540 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CD8AP01732 235 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC25A4P12235 298 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 FNTBP49356 437 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 PPP1CAP62136 330 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CXADRP78310 365 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 BLOC1S1P78537 153 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 PDZK1IP1Q13113 114 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 NDUFAF6Q330K2 333 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEM69Q5SWH9 247 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 H3F3CQ6NXT2 135 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 C11orf88Q6PI97 169 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 FIP1L1Q6UN15 594 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 MBOAT2Q6ZWT7 520 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 TAF8Q7Z7C8 310 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CA13Q8N1Q1 262 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 OR6N1Q8NGY5 312 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC41A3Q96GZ6 507 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 TBX5Q99593 518 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF350Q9GZX5 532 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ALX4Q9H161 411 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 GPR27Q9NS67 375 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 KLK11Q9UBX7 282 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 MIOXQ9UGB7 285 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 FOXJ3Q9UPW0 622 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 PLEKHA6Q9Y2H5 1048 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 TRAV14DV4A0A0A6YYC5 116 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 MCIDASD6RGH6 385 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC2A10O95528 541 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 THBS1P07996 1170 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ABOP16442 354 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 RPS4Y1P22090 263 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ACHEP22303 614 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 PTAFRP25105 342 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 POU4F2Q12837 409 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 DUSP8Q13202 625 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SMCO1Q147U7 214 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CSRP2Q16527 193 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 Q6ZS52 159 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF761Q86XN6 746 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 OR52L1Q8NGH7 329 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 OR1J4Q8NGS1 313 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ARL11Q969Q4 196 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SMIM19Q96E16 107 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 UBQLN3Q9H347 655 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms