RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 PODNL1Q6PEZ8 512 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 STAC2Q6ZMT1 411 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 CYS1Q717R9 158 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 RPS27LQ71UM5 84 aaKnown RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 HIPK1Q86Z02 1210 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 C1orf52Q8N6N3 182 aaKnown RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ZNF611Q8N823 705 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 GBP7Q8N8V2 638 aaPredicted RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 OR4F6Q8NGB9 312 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 RAB3IL1Q8TBN0 382 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ZFAND2BQ8WV99 257 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 RNF138Q8WVD3 245 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 NEUROG1Q92886 237 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 EXOSC8Q96B26 276 aaKnown RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ORAI1Q96D31 301 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 PHF21BQ96EK2 531 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 DTNBP1Q96EV8 351 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 GRAMD2BQ96HH9 432 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 VSTM2LQ96N03 204 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 BTBD9Q96Q07 612 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 TMEM204Q9BSN7 226 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 REG4Q9BYZ8 158 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 PRRG4Q9BZD6 226 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ACTR6Q9GZN1 396 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 SLC5A7Q9GZV3 580 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 STMN4Q9H169 189 aaPredicted RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ELOVL6Q9H5J4 265 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 FOLH1BQ9HBA9 442 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 SIRT3Q9NTG7 399 aaPredicted RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 OR6C3Q9NZP0 311 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 RNF14Q9UBS8 474 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 PCTPQ9UKL6 214 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 PSME2Q9UL46 239 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 ZNF175Q9Y473 711 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 OR10H1Q9Y4A9 318 aa4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 NUP214P35658 2090 aaPredicted RBP4.76□□□□□ -1.65
HNRNPC-233ENST00000557768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.75□□□□□ -1.653e-37■■■■■ 73.4
HNRNPC-233ENST00000557768 PLCE1Q9P212 2302 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 OOEPA6NGQ2 149 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 J3QR06 171 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SLC33A1O00400 549 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 EIF3HO15372 352 aaKnown RBP eCLIP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 CLOCKO15516 846 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SPINT2O43291 252 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ZSCAN12O43309 604 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 CD5LO43866 347 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 NDUFS7O75251 213 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 B3GALNT1O75752 331 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 BCAS2O75934 225 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 KLHL2O95198 593 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 NTN1O95631 604 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 PLGP00747 810 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 IFNA2P01563 188 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SOD3P08294 240 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 IL3P08700 152 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 GSTA2P09210 222 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ADRA2CP18825 462 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 STX2P32856 288 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MAGEA4P43358 317 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 RFX3P48380 749 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 PLTPP55058 493 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 CTBP2P56545 445 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MRPS22P82650 360 aaKnown RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ZNF155Q12901 538 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 CALCOCO2Q13137 446 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MELKQ14680 651 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 TRADDQ15628 312 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 UAP1Q16222 522 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 TMEM44Q2T9K0 475 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 TCHHL1Q5QJ38 904 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SLC16A12Q6ZSM3 486 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MARCH3Q86UD3 253 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 TIGD4Q8IY51 512 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ZNF619Q8N2I2 560 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 CEP112Q8N8E3 955 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 OR7G2Q8NG99 324 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 OR6K3Q8NGY3 331 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ZNF675Q8TD23 568 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SELENOMQ8WWX9 145 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 TMEM158Q8WZ71 300 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 S100PBPQ96BU1 408 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MTBPQ96DY7 904 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ZBED6CLQ96FA7 236 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ATP6V0BQ99437 205 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SEPHS2Q99611 448 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 ERP44Q9BS26 406 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 INPP5KQ9BT40 448 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 NTMT1Q9BV86 223 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 FAIM2Q9BWQ8 316 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 MAP6D1Q9H9H5 199 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SDHAF3Q9NRP4 125 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 LEF1Q9UJU2 399 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 VDAC3Q9Y277 283 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 B3GALT5Q9Y2C3 310 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 PAM16Q9Y3D7 125 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 RNF115Q9Y4L5 304 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 SAR1BQ9Y6B6 198 aa4.75□□□□□ -1.65
HNRNPC-233ENST00000557768 AP4B1Q9Y6B7 739 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms