RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ANKRD19PQ9H560 264 aa10.32□□□□□ -0.76
RAB5C-204ENST00000547517 CXorf56Q9H5V9 222 aa10.32□□□□□ -0.76
RAB5C-204ENST00000547517 CISD1Q9NZ45 108 aaKnown RBP10.32□□□□□ -0.76
RAB5C-204ENST00000547517 GLTPQ9NZD2 209 aa10.32□□□□□ -0.76
RAB5C-204ENST00000547517 LAMP3Q9UQV4 416 aa10.32□□□□□ -0.76
RAB5C-204ENST00000547517 HIF3AQ9Y2N7 669 aa10.32□□□□□ -0.76
RAB5C-204ENST00000547517 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 TRBV4-1A0A0J9YWV2 114 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 HTR3EA5X5Y0 456 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 FABP3P05413 133 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 TSPAN19P0C672 248 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 CECR9P0C854 216 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 ITGA2P17301 1181 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 NKX6-1P78426 367 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 CBX1P83916 185 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 MYBPC1Q00872 1141 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 RUNX1T1Q06455 604 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 NPRL3Q12980 569 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 DGCR6Q14129 220 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 PGGHGQ32M88 737 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 Q5PR19 223 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 HDDC2Q7Z4H3 204 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 OAFQ86UD1 273 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 MDP1Q86V88 176 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 CDK20Q8IZL9 346 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 RNF113BQ8IZP6 322 aaKnown RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 DEPDC4Q8N2C3 294 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 SYT14Q8NB59 555 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 OR52J3Q8NH60 311 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 CCDC124Q96CT7 223 aaKnown RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 FAM46AQ96IP4 442 aaKnown RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 ZNF347Q96SE7 839 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 KCNS3Q9BQ31 491 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 SEC61A2Q9H9S3 476 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 PRPF19Q9UMS4 504 aaKnown RBP10.31□□□□□ -0.76
RAB5C-204ENST00000547517 MOKQ9UQ07 419 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 TMEM5Q9Y2B1 443 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 ROS1P08922 2347 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 DSCAMO60469 2012 aa10.31□□□□□ -0.76
RAB5C-204ENST00000547517 CADP27708 2225 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 E7EQL1 145 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CDC42EP2O14613 210 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 TRMUO75648 421 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 UBOX5O94941 541 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 HLA-HP01893 362 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CELA3BP08861 270 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 QDPRP09417 244 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 DANCRP0C864 163 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CD79AP11912 226 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 ACADSP16219 412 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 SLC9A3P48764 834 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 PTH2RP49190 550 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 ADAM8P78325 824 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CD47Q08722 323 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 SEC23BQ15437 767 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 IQCCQ4KMZ1 466 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 ARMC4Q5T2S8 1044 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 MYPOPQ86VE0 399 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 LRRC75A-AS1Q8N1F1 130 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 ARHGAP24Q8N264 748 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 WFDC11Q8NEX6 87 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 IGFBPL1Q8WX77 278 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 NANOS1Q8WY41 292 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 HTRA1Q92743 480 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 HDAC2Q92769 488 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 MCHR2Q969V1 340 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 GTPBP3Q969Y2 492 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CLPTM1LQ96KA5 538 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 KATNB1Q9BVA0 655 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 NOX3Q9HBY0 568 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 MOV10Q9HCE1 1003 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 KRCC1Q9NPI7 259 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 FAIMQ9NVQ4 179 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 ACTR3BQ9P1U1 418 aa10.3□□□□□ -0.76
RAB5C-204ENST00000547517 STX18Q9P2W9 335 aaKnown RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 CRNNQ9UBG3 495 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-204ENST00000547517 F8P00451 2351 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 NPIPB13A6NJU9 1138 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 NPIPB4C9JG80 1138 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 DHHO43323 396 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 GADD45GO95257 159 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 SLC2A10O95528 541 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 IGKV3-15P01624 115 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 IGLV1-44P01699 117 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 IGHMP01871 453 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 CRYAAP02489 173 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 CBR1P16152 277 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 PAX7P23759 505 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 RRM2P31350 389 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 RPL4P36578 427 aaKnown RBP10.29□□□□□ -0.76
RAB5C-204ENST00000547517 CDKN1AP38936 164 aa10.29□□□□□ -0.76
RAB5C-204ENST00000547517 LIMS1P48059 325 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms