RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 RHOP08100 348 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 OR8G3PP0DMU2 310 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 ARHGDIBP52566 201 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 GUCA2AQ02747 115 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 VWA2Q5GFL6 755 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 DHRS7BQ6IAN0 325 aaPredicted RBP16.02■□□□□ 0.15
RAB40C-205ENST00000539661 LIN54Q6MZP7 749 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF550Q7Z398 422 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 PUSL1Q8N0Z8 303 aaKnown RBP16.02■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM229BQ8NBD8 167 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 VRK1Q99986 396 aaPredicted RBP16.02■□□□□ 0.15
RAB40C-205ENST00000539661 COMMD4Q9H0A8 199 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 CXXC1Q9P0U4 656 aaPredicted RBP16.02■□□□□ 0.15
RAB40C-205ENST00000539661 TBX21Q9UL17 535 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 TICRRQ7Z2Z1 1910 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 TRAV8-7A0A075B6U6 113 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 A0A1B0GVT2 93 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 PRR19A6NJB7 356 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ABHD16AO95870 558 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 PVALBP20472 110 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 RFC3P40938 356 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 PRPS1P60891 318 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 LDLRAD3Q86YD5 345 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 SPAG16Q8N0X2 631 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 OR1M1Q8NGA1 313 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ZPLD1Q8TCW7 415 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF471Q9BX82 626 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 TRPV4Q9HBA0 871 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ABHD14A-ACY1A0A1B0GW23 586 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 URADA6NGE7 173 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM212A6NML5 194 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 OR52A4PA6NMU1 304 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 NUDT19A8MXV4 375 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ADAM11O75078 769 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 NKX2-2O95096 273 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 CXCL14O95715 111 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF10P21506 573 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 GRPRP30550 384 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 UBE2IP63279 158 aaKnown RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 DCDP81605 110 aaKnown RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 HTRA4P83105 476 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 C10orf91Q5T1B1 145 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 GPR148Q8TDV2 347 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 FGF13Q92913 245 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 ADAD1Q96M93 576 aaKnown RBP16.01■□□□□ 0.15
RAB40C-205ENST00000539661 KIR3DX1Q9H7L2 352 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 PCDHB10Q9UN67 800 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 OR1A2Q9Y585 309 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 NOTCH4Q99466 2003 aa16.01■□□□□ 0.15
RAB40C-205ENST00000539661 A0A087WV48 116 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 LRRC72A6NJI9 287 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM200CA6NKL6 621 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 OR4C45A6NMZ5 311 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 HSPB2A8KAH6 182 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 FGF18O76093 207 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 EMDP50402 254 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 HSPB2Q16082 182 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 YOD1Q5VVQ6 348 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM205Q6UW68 189 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ZAR1Q86SH2 424 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ETFBKMTQ8IXQ9 262 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 OR51D1Q8NGF3 324 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 HOXB13Q92826 284 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 SLC25A28Q96A46 364 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TM4SF19Q96DZ7 209 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 LMAN2LQ9H0V9 348 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 LYRM4Q9HD34 91 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 PHPT1Q9NRX4 125 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF107Q9UII5 783 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 LAMA1P25391 3075 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM72A0PK05 275 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TTLL8A6PVC2 850 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 GPR31O00270 319 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 DNAJB6O75190 326 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 POU3F4P49335 361 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 EFNB2P52799 333 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 RPS4XP62701 263 aaKnown RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 PRICKLE4Q2TBC4 344 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF528Q3MIS6 628 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 MCHR2Q969V1 340 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM106AQ96A25 262 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 RASD2Q96D21 266 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF75AQ96N20 296 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 MNTQ99583 582 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ESRP2Q9H6T0 727 aaKnown RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 MBNL1Q9NR56 388 aaKnown RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 CTSFQ9UBX1 484 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF230Q9UIE0 474 aaPredicted RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 CARHSP1Q9Y2V2 147 aaKnown RBP16■□□□□ 0.15
RAB40C-205ENST00000539661 SCN3AQ9NY46 2000 aa16■□□□□ 0.15
RAB40C-205ENST00000539661 RNF222A6NCQ9 220 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 IMPA2O14732 288 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 LATO43561 262 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 RAB3DO95716 219 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 IFNA4P05014 189 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 HLA-GP17693 338 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 MEOX2P50222 304 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms