RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF99A8MXY4 864 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 TRMUO75648 421 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 IGHG1P01857 330 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 IGHMP01871 453 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 RAP2AP10114 183 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 ACADSP16219 412 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 HOXC12P31275 282 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 PRPS1P60891 318 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 FLOT2Q14254 428 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 TAF11Q15544 211 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 HIST3H3Q16695 136 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 LRFN4Q6PJG9 635 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 OR4C15Q8NGM1 316 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 CANT1Q8WVQ1 401 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 LRMDAQ9H2I8 198 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 ESRP2Q9H6T0 727 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 OBP2BQ9NPH6 170 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 AURKCQ9UQB9 309 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 SIGLEC7Q9Y286 467 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 ROS1P08922 2347 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 ARPC4-TTLL3A0A0A6YYG9 625 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 DHRS12A0PJE2 317 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 CENPBD1B2RD01 187 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 HOXB1P14653 301 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF83P51522 516 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 RPL27P61353 136 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 BSPH1Q075Z2 132 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 TOP3AQ13472 1001 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 KLHL24Q6TFL4 600 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF704Q6ZNC4 412 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF627Q7L945 461 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 HDDC2Q7Z4H3 204 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 NOXO1Q8NFA2 376 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 HDAC2Q92769 488 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 RSRC1Q96IZ7 334 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 CHID1Q9BWS9 393 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 C1QTNF6Q9BXI9 259 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 VNN3Q9NY84 501 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF346Q9UL40 294 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 TMCC3Q9ULS5 477 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 POFUT2Q9Y2G5 429 aa19.87■□□□□ 0.77
SFSWAP-204ENST00000535399 CCDC168Q8NDH2 2452 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 TCRBV3S1A0A5B6 114 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 UNC119BA6NIH7 251 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 TNFRSF11BO00300 401 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 OR10H3O60404 316 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 SEC14L2O76054 403 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 CD3EP07766 207 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 CLRN1P58418 232 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 OR2T5Q6IEZ7 315 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 PAMR1Q6UXH9 720 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 SPATA24Q86W54 205 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 SYT14Q8NB59 555 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 OR2T29Q8NH02 315 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF519Q8TB69 540 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 TSPAN32Q96QS1 320 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 STX18Q9P2W9 335 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 ST6GALNAC2Q9UJ37 374 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 RNF115Q9Y4L5 304 aa19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 MAGED1Q9Y5V3 778 aaPredicted RBP19.86■□□□□ 0.77
SFSWAP-204ENST00000535399 WNT11O96014 354 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 CD14P08571 375 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 QDPRP09417 244 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 FPR3P25089 353 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 IFNGR2P38484 337 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 GSSP48637 474 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 FXYD6P3P58550 94 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 UBE2NP61088 152 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 ERVK-25P63136 954 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 TUBA1BP68363 451 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 TUBA4AP68366 448 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 PGBD2Q6P3X8 592 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 KLHL17Q6TDP4 642 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 THSD4Q6ZMP0 1018 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 TUBA1AQ71U36 451 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 MCHR2Q969V1 340 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 NMD3Q96D46 503 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 KCNK17Q96T54 332 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 FOXB1Q99853 325 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 KATNB1Q9BVA0 655 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 PLEKHA6Q9Y2H5 1048 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 CADP27708 2225 aa19.85■□□□□ 0.77
SFSWAP-204ENST00000535399 CREBBPQ92793 2442 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 M0R1B8 84 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 DHHO43323 396 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 NDUFB2O95178 105 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 CD40P25942 277 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 RPL4P36578 427 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF133P52736 654 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 MYBPC1Q00872 1141 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 PPP1R8Q12972 351 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 FAM205BPQ63HN1 556 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF770Q6IQ21 691 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 C1orf94Q6P1W5 598 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 TMEM108Q6UXF1 575 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF813Q6ZN06 617 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 FAM122BQ7Z309 247 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 LILRB1Q8NHL6 650 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 GPX7Q96SL4 187 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 MMADHCQ9H3L0 296 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1036.3 ms