RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ZNF227Q86WZ6 799 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
GPC1-209ENST00000495100 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 INTS14Q96SY0 518 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 B9D1Q9UPM9 204 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 DHDHQ9UQ10 334 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 COA3Q9Y2R0 106 aaPredicted RBP12.24□□□□□ -0.45
GPC1-209ENST00000495100 FAM221BA6H8Z2 402 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 PRR32B1ATL7 298 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 GPR171O14626 319 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 CREBL2O60519 120 aaPredicted RBP12.24□□□□□ -0.45
GPC1-209ENST00000495100 ALOX12BO75342 701 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 ALX3O95076 343 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 WISP1O95388 367 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 AHSA1O95433 338 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 CFDP00746 253 aaPredicted RBP12.24□□□□□ -0.45
GPC1-209ENST00000495100 ATP1B1P05026 303 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 CD2P06729 351 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 ACAA2P42765 397 aaKnown RBP12.24□□□□□ -0.45
GPC1-209ENST00000495100 RABIFP47224 123 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 CAMK2DQ13557 499 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 HTR4Q13639 388 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 ACTR6Q9GZN1 396 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 HRASLSQ9HDD0 168 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 MED17Q9NVC6 651 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 GSKIPQ9P0R6 139 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 CTSFQ9UBX1 484 aa12.24□□□□□ -0.45
GPC1-209ENST00000495100 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 IFITM5A6NNB3 132 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 MASP2O00187 686 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 P2RY10O00398 339 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 DHPSP49366 369 aaPredicted RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 SNU13P55769 128 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 EIF2B5Q13144 721 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 EXOSC2Q13868 293 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 INPP5JQ15735 1006 aaPredicted RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 SLC29A4Q7RTT9 530 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 OR2I1PQ8NGU4 316 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 KISS1RQ969F8 398 aaPredicted RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 TAAR8Q969N4 342 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 UBQLN4Q9NRR5 601 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 FREM2Q5SZK8 3169 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 NPIPA5E9PKD4 350 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 PDCD5O14737 125 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 AKR1D1P51857 326 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ARFIP1P53367 373 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 FZD2Q14332 565 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 C17orf50Q8WW18 174 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 NXPE2Q96DL1 559 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CUTCQ9NTM9 273 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 PRR13Q9NZ81 148 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 NPIPA1Q9UND3 350 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 FRYQ5TBA9 3013 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 A0A1W2PNR3 127 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 PYCARD-AS1I3L0S3 204 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 PEX14O75381 377 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 HTR3BO95264 441 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 IGHA1P01876 353 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CD3DP04234 171 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 IFNA6P05013 189 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CFIP05156 583 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 THBS1P07996 1170 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CD14P08571 375 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CT45A8P0DMV1 189 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CT45A9P0DMV2 189 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 IL11P20809 199 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ENDOUP21128 410 aaKnown RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 SLC6A1P30531 599 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CBFBQ13951 182 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ACKR1Q16570 336 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 YIF1BQ5BJH7 314 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CT45A2Q5DJT8 189 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 STAC2Q6ZMT1 411 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 ZNF587Q96SQ5 575 aaPredicted RBP12.23□□□□□ -0.45
GPC1-209ENST00000495100 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 CA10Q9NS85 328 aa12.23□□□□□ -0.45
GPC1-209ENST00000495100 SLC22A5O76082 557 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 DIO1P49895 249 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 CCR9P51686 369 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 STPG1Q5TH74 334 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 RPL13AP3Q6NVV1 102 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 COX15Q7KZN9 410 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 ZNF471Q9BX82 626 aaPredicted RBP12.22□□□□□ -0.45
GPC1-209ENST00000495100 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 TBX19O60806 448 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 RORAP35398 523 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 SCRN3Q0VDG4 424 aa12.22□□□□□ -0.45
GPC1-209ENST00000495100 TMPRSS11FQ6ZWK6 438 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms