RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MAN2C1Q9NTJ4 1040 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 B3GNT2Q9NY97 397 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 GLTPQ9NZD2 209 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 MED31Q9Y3C7 131 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 ZANQ9Y493 2812 aa11.21□□□□□ -0.62
HDAC1-209ENST00000484305 NIPBLQ6KC79 2804 aaeCLIP11.2□□□□□ -0.624e-7■■■■■ 50.1
HDAC1-209ENST00000484305 CR1P17927 2039 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 NDUFAB1O14561 156 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 BCL10O95999 233 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 HLA-HP01893 362 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 IFNW1P05000 195 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 TSPAN19P0C672 248 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 PGA4P0DJD7 388 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 ARR3P36575 388 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 PIGFQ07326 219 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 NPRL3Q12980 569 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 ETFDHQ16134 617 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 MST1LQ2TV78 715 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 IFI44LQ53G44 452 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 FKBP9P1Q75LS8 142 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 TSEN54Q7Z6J9 526 aaKnown RBP11.2□□□□□ -0.62
HDAC1-209ENST00000484305 RNF148Q8N7C7 305 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 RBM15BQ8NDT2 890 aaKnown RBP11.2□□□□□ -0.62
HDAC1-209ENST00000484305 MOSPD2Q8NHP6 518 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 GEMIN6Q8WXD5 167 aaKnown RBP11.2□□□□□ -0.62
HDAC1-209ENST00000484305 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 FOXB1Q99853 325 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 FNDC11Q9BVV2 318 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 MOV10Q9HCE1 1003 aaKnown RBP11.2□□□□□ -0.62
HDAC1-209ENST00000484305 SPAG4Q9NPE6 437 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF224Q9NZL3 707 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 EGFL7Q9UHF1 273 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
HDAC1-209ENST00000484305 TLN2Q9Y4G6 2542 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 A0A1W2PRG6 482 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 SSX4O60224 188 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 QDPRP09417 244 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 CD79AP11912 226 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 IFI30P13284 250 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 IFNA8P32881 189 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 HGFACQ04756 655 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 HIST3H3Q16695 136 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 DNM1P46Q6ZS02 220 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 MEX3DQ86XN8 651 aaKnown RBP11.19□□□□□ -0.62
HDAC1-209ENST00000484305 OFCC1Q8IZS5 231 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ASB10Q8WXI3 467 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 BPIFA2Q96DR5 249 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 FBXO17Q96EF6 278 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF75AQ96N20 296 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF347Q96SE7 839 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 MRPL13Q9BYD1 178 aaKnown RBP11.19□□□□□ -0.62
HDAC1-209ENST00000484305 BARX1Q9HBU1 254 aaPredicted RBP11.19□□□□□ -0.62
HDAC1-209ENST00000484305 CA10Q9NS85 328 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ARL8BQ9NVJ2 186 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ADA2Q9NZK5 511 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
HDAC1-209ENST00000484305 IGHV2OR16-5A0A0B4J2B6 119 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 MCIDASD6RGH6 385 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 RNF223E7ERA6 249 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 H7C417 338 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 DHHO43323 396 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 PRSS23O95084 383 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 IGHG1P01857 330 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 HEXAP06865 529 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 PATE4P0C8F1 98 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
HDAC1-209ENST00000484305 MAKP20794 623 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 SERPINF1P36955 418 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 GIPRP48546 466 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
HDAC1-209ENST00000484305 CLRN1P58418 232 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 CHRNB3Q05901 458 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 TRAM2Q15035 370 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 RAB35Q15286 201 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 GLYATQ6IB77 296 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 VHLLQ6RSH7 139 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 TBPL2Q6SJ96 375 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 PIWIL3Q7Z3Z3 882 aaKnown RBP11.18□□□□□ -0.62
HDAC1-209ENST00000484305 SKA3Q8IX90 412 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 NRMQ8IXM6 262 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 SLC22A24Q8N4F4 322 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 SYT14Q8NB59 555 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 FAM156AQ8NDB6 213 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 MAPK1IP1LQ8NDC0 245 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 NOXO1Q8NFA2 376 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 OR4F15Q8NGB8 312 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 FGFBP3Q8TAT2 258 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 MCHR2Q969V1 340 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 SEPHS2Q99611 448 aa11.18□□□□□ -0.62
HDAC1-209ENST00000484305 DCAF13Q9NV06 445 aaKnown RBP11.18□□□□□ -0.62
HDAC1-209ENST00000484305 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms