RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 FXYD6P3P58550 94 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 LSM6P62312 80 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ESRRGP62508 458 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SPIBQ01892 262 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SEC23BQ15437 767 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 KCNMB1Q16558 191 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ACKR1Q16570 336 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RFX4Q33E94 735 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FGD3Q5JSP0 725 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 TSPO2Q5TGU0 170 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FAM27BQ5VT28 67 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 C1orf146Q5VVC0 180 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 HMBOX1Q6NT76 420 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 PGBD2Q6P3X8 592 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FAHD1Q6P587 224 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 DNM1P34Q6PK57 102 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 KLHL17Q6TDP4 642 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 TMEM108Q6UXF1 575 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CASP12Q6UXS9 341 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CYP2R1Q6VVX0 501 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 MEX3BQ6ZN04 569 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 C20orf204Q6ZNR8 217 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 BHLHA15Q7RTS1 189 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ZER1Q7Z7L7 766 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GPAT4Q86UL3 456 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ZBTB46Q86UZ6 589 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 HIPK1Q86Z02 1210 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF295-AS1Q8N0V1 137 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ATP6V1C2Q8NEY4 427 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 OR52L1Q8NGH7 329 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 OR1K1Q8NGR3 316 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GNPDA2Q8TDQ7 276 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 IGFBPL1Q8WX77 278 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 NANOS1Q8WY41 292 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 BCL2L2Q92843 193 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GTPBP3Q969Y2 492 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 MARVELD3Q96A59 401 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SLC25A36Q96CQ1 311 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CCDC124Q96CT7 223 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 MUCL1Q96DR8 90 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CENPNQ96H22 339 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RSRC1Q96IZ7 334 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RDH12Q96NR8 316 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RBP7Q96R05 134 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 PRRG3Q9BZD7 231 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ACTR6Q9GZN1 396 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RACGAP1Q9H0H5 632 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 OPN3Q9H1Y3 402 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ESRP2Q9H6T0 727 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GPR35Q9HC97 309 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SLC17A5Q9NRA2 495 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GLTPQ9NZD2 209 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 GMPR2Q9P2T1 348 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 UPB1Q9UBR1 384 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 AURKCQ9UQB9 309 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SAMHD1Q9Y3Z3 626 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 AP4S1Q9Y587 144 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SLC25A15Q9Y619 301 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FKBP7Q9Y680 259 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 LRBAP50851 2863 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 PDZD2O15018 2839 aa4.46□□□□□ -1.69
HDAC6-223ENST00000480525 POLQO75417 2590 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 IGHV3-15A0A0B4J1V0 119 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 TEX13CA0A0J9YWL9 993 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 SLC22A23A1A5C7 686 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 PRSS37A4D1T9 235 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 UNC119BA6NIH7 251 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 DEFB108AA8MXU0 73 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 BLOC1S5-TXNDC5H3BN57 136 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 C19orf84I3L1E1 186 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 J3KTA2 159 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 hCG_2039718K7EN88 272 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 BHLHE40O14503 412 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 XKRYO14609 159 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CASKO14936 926 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 ZNHIT1O43257 154 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 DHHO43323 396 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 RNF13O43567 381 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 OR10H3O60404 316 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CCNB2O95067 398 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 UBL3O95164 117 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 THBDP07204 575 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 OR8G3PP0DMU2 310 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 IFNGR1P15260 489 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CBR1P16152 277 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CCNA2P20248 432 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 TCEA1P23193 301 aaKnown RBP4.46□□□□□ -1.7
HDAC6-223ENST00000480525 LOXP28300 417 aaPredicted RBP4.46□□□□□ -1.7
HDAC6-223ENST00000480525 GRNP28799 593 aaKnown RBP4.46□□□□□ -1.7
HDAC6-223ENST00000480525 PCSK6P29122 969 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 HOXC12P31275 282 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 EVX1P49640 407 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 SELENOPP49908 381 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 RNF144AP50876 292 aaPredicted RBP4.46□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF84P51523 738 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CLDN17P56750 224 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 PCBD1P61457 104 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 SIRPAP78324 504 aa4.46□□□□□ -1.7
HDAC6-223ENST00000480525 CBX1P83916 185 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms