RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CGAP01215 116 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SCG5P05408 212 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 GLI4P10075 376 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 CLUP10909 449 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SLC2A5P22732 501 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ACVR2AP27037 513 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 NOS3P29474 1203 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PTGER4P35408 488 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TIMP3P35625 211 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ACVR1BP36896 505 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SLC15A1P46059 708 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SELENOPP49908 381 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ZNF133P52736 654 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 BIDP55957 195 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 CXCR4P61073 352 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP39-213ENST00000467885 FOXF2Q12947 444 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MED21Q13503 144 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 C1DQ13901 141 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 CRMP1Q14194 572 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 RNPS1Q15287 305 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 SF3B4Q15427 424 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP39-213ENST00000467885 SMN1Q16637 294 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 ACSF3Q4G176 576 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 TMEM201Q5SNT2 666 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 LINC01590Q5TEZ4 76 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SLC25A47Q6Q0C1 308 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 UGT2A3Q6UWM9 527 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 CASP12Q6UXS9 341 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 B3GLCTQ6Y288 498 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MEPCEQ7L2J0 689 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 LINGO2Q7L985 606 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PKD1L2Q7Z442 2459 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 GPAT4Q86UL3 456 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 UEVLDQ8IX04 471 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 C20orf196Q8IYI0 205 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TMEM123Q8N131 208 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 Q8N3U1 123 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 C9orf106Q8NAJ2 232 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SYT14Q8NB59 555 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 CYB561A3Q8NBI2 242 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ST6GALNAC3Q8NDV1 305 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 OR52L1Q8NGH7 329 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MBD3L2Q8NHZ7 208 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 FANK1Q8TC84 345 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 CPT1CQ8TCG5 803 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TMEM45BQ96B21 275 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 INTS12Q96CB8 462 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 ZHX1-C8orf76Q96EF9 292 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ADAD1Q96M93 576 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 ZNF582Q96NG8 517 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 TSSK2Q96PF2 358 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 OR2M2Q96R28 347 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SNX18Q96RF0 628 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TRIB1Q96RU8 372 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 DMRTA2Q96SC8 542 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 APOL4Q9BPW4 351 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TTYH2Q9BSA4 534 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PRRG4Q9BZD6 226 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 NUAK2Q9H093 628 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 FN3KQ9H479 309 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MED20Q9H944 212 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 HINT3Q9NQE9 182 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 GLRX2Q9NS18 164 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 RASSF1Q9NS23 344 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PLCXD1Q9NUJ7 323 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TBC1D23Q9NUY8 699 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ASB6Q9NWX5 421 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 VSX1Q9NZR4 365 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 KLHL21Q9UJP4 597 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 FOXD3Q9UJU5 478 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 MCTS1Q9ULC4 181 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 CLEC4AQ9UMR7 237 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 B9D1Q9UPM9 204 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 GPR52Q9Y2T5 361 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PRRC2CQ9Y520 2896 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 IGLV1-36A0A0B4J1U3 117 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 A6NIZ1 184 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 CENPBD1B2RD01 187 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 B8ZZF3 427 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 RPL36A-HNRNPH2H7BZ11 118 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 J3QRE1 110 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 GPR171O14626 319 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 PRRG2O14669 202 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 MPZL2O60487 215 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 SS18L1O75177 396 aaPredicted RBP5.26□□□□□ -1.57
USP39-213ENST00000467885 MRPL33O75394 65 aaKnown RBP5.26□□□□□ -1.57
USP39-213ENST00000467885 UPK3AO75631 287 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 SERPINI2O75830 405 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 TNFSF13O75888 250 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 MPZL1O95297 269 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 TPOP07202 933 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 STSP08842 583 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 ADRA2AP08913 450 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 QDPRP09417 244 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 PGA4P0DJD7 388 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 PGA3P0DJD8 388 aa5.26□□□□□ -1.57
USP39-213ENST00000467885 GTF2E2P29084 291 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms