RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 VWC2LB2RUY7 222 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HNRNPCL2B2RXH8 293 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HNRNPCL3B7ZW38 293 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 FTCDNL1E5RQL4 147 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF587BE7ETH6 402 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LYNX1G3V0Z9 82 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MS4A18H0YCH9 400 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 H7C417 338 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 M0R3G1 203 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 FAAHO00519 579 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 UBDO15205 165 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PAX4O43316 350 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LMX1BO60663 402 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HNRNPCL1O60812 293 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 NPIPB7O75200 414 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HPRP00739 348 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CECR9P0C854 216 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ZCCHC18P0CG32 403 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 FAM157CP0CG43 387 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HNRNPCL4P0DMR1 293 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LYNX1P0DP58 116 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PNMTP11086 282 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HLA-DOBP13765 273 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 IDO1P14902 403 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 UQCRBP14927 111 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC25A16P16260 332 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF43P17038 809 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 IGFBP5P24593 272 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HTR2AP28223 471 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 THBS4P35443 961 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC6A9P48067 706 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PDLIM4P50479 330 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ANXA11P50995 505 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MAP2K6P52564 334 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CRISP3P54108 245 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SLURP1P55000 103 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 UBE2NP61088 152 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MAGOHP61326 146 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 VLDLRP98155 873 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 IL1RL1Q01638 556 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 NAAAQ02083 359 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 HGFACQ04756 655 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PIGFQ07326 219 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 NPRL3Q12980 569 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LARS2Q15031 903 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ADIPOQQ15848 244 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MS4A18Q3C1V0 323 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LIN52Q52LA3 116 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PDCD4Q53EL6 469 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PAGE3Q5JUK9 113 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CARD17Q5XLA6 110 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 KLHL24Q6TFL4 600 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SSX8Q7RTT4 187 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC46A3Q7Z3Q1 461 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 FUNDC1Q8IVP5 155 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 WDFY1Q8IWB7 410 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF440Q8IYI8 595 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PQLC1Q8N2U9 271 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 C17orf78Q8N4C9 275 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 LINC01356Q8N9X3 169 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SYT8Q8NBV8 401 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MFSD8Q8NHS3 518 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 NFKBIDQ8NI38 313 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 OIT3Q8WWZ8 545 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 GTF2H4Q92759 462 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PROX1Q92786 737 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MSI2Q96DH6 328 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ITCHQ96J02 903 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 TXNDC15Q96J42 360 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 MAELQ96JY0 434 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 OXGR1Q96P68 337 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 KCNS3Q9BQ31 491 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 EBF4Q9BQW3 602 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 EMC6Q9BV81 110 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PTDSS2Q9BVG9 487 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 PAIP1Q9H074 479 aaKnown RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SHARPINQ9H0F6 387 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 OR10A2Q9H208 303 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 NELFAQ9H3P2 528 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 RMND5AQ9H871 391 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 GPR35Q9HC97 309 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SDR39U1Q9NRG7 319 aaPredicted RBP4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CA10Q9NS85 328 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC25A37Q9NYZ2 338 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 CALML5Q9NZT1 146 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 B3GAT1Q9P2W7 334 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 RAB21Q9UL25 225 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 DOCK11Q5JSL3 2073 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 ATRQ13535 2644 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IGKV1D-42A0A075B6H8 117 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A1B0GWA3 101 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 OR6C65A6NJZ3 312 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 B9A039 149 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 C5orf58C9J3I9 102 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 LRRN3E7EW58 273 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SLCO1B7G3V0H7 640 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TPST2O60704 377 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms