RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NECTIN4Q96NY8 510 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 MCEEQ96PE7 176 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 RNF157Q96PX1 679 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR6C1Q96RD1 312 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 CDCA3Q99618 268 aaPredicted RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 PKMYT1Q99640 499 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 GPR22Q99680 433 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 TMEM43Q9BTV4 400 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 ABHD6Q9BV23 337 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 NTMT1Q9BV86 223 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 KATNB1Q9BVA0 655 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 CDCA4Q9BXL8 241 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 OPN3Q9H1Y3 402 aaPredicted RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR51E2Q9H255 320 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC38A1Q9H2H9 487 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 EXOSC4Q9NPD3 245 aaKnown RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 TMEM138Q9NPI0 162 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 CTPS2Q9NRF8 586 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 SDR39U1Q9NRG7 319 aaPredicted RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 FLRT3Q9NZU0 649 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 MRPL15Q9P015 296 aaKnown RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 COX16Q9P0S2 106 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 IKZF3Q9UKT9 509 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 PPIEQ9UNP9 301 aaKnown RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 NPTNQ9Y639 398 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 CLCA3PQ9Y6N3 262 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 NUP188Q5SRE5 1749 aa2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 TNRC6CQ9HCJ0 1690 aaKnown RBP2.98□□□□□ -1.93
SDCBPP3-201ENST00000419629 SIPA1L3O60292 1781 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 RBBP6Q7Z6E9 1792 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 COL24A1Q17RW2 1714 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 TRAV19A0A0A6YYK7 116 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 TEX13DA0A0J9YY54 714 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 C2orf92A0A1B0GVN3 265 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 GNG14A0A1W2PPG7 69 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 A0A1W2PQL4 384 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 HYKKA2RU49 373 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 WASH3PC4AMC7 463 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 NEDD8-MDP1E9PL57 170 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 M0QZK8 103 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF197O14709 1029 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ITGB1BP1O14713 200 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CASKO14936 926 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 TOX3O15405 576 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 TXNL1O43396 289 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 SSNA1O43805 119 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 MED6O75586 246 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 EML2O95834 649 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 HPP00738 406 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CFDP00746 253 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 EDN1P05305 212 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CRYBA1P05813 215 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CD2P06729 351 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ASGR1P07306 291 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 FGF4P08620 206 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 HCKP08631 526 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR4E1P0C645 316 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 PRPS2P11908 318 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 PIPP12273 146 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ADRB3P13945 408 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 MUC1P15941 1255 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 NCK1P16333 377 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF10P21506 573 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 UQCRC2P22695 453 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 DDTP30046 118 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 SFNP31947 248 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 S100A11P31949 105 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 MNDAP41218 407 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CD86P42081 329 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CDKN2CP42773 168 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 KIR3DL2P43630 455 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 OMPP47874 163 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 KCNJ3P48549 501 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CSNK1EP49674 416 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 PDX1P52945 283 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 PLK1P53350 603 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CDH11P55287 796 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 GMFBP60983 142 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 NUTF2P61970 127 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 EIF5AP63241 154 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 DCDP81605 110 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 BEX3Q00994 111 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 TNFRSF17Q02223 184 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 CAMK2DQ13557 499 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 DDX39BQ13838 428 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 PEA15Q15121 130 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 P2RY14Q15391 338 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNHIT3Q15649 155 aaPredicted RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 KIAA1644Q3SXP7 199 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 C9orf152Q5JTZ5 239 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC35D3Q5M8T2 416 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 SPOUT1Q5T280 376 aaKnown RBP2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 BCL2L15Q5TBC7 163 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 LIPNQ5VXI9 398 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 ATRAIDQ6UW56 229 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 BAIAP2L2Q6UXY1 529 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 LINGO4Q6UY18 593 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 NPSR1Q6W5P4 371 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 GCNT7Q6ZNI0 430 aa2.97□□□□□ -1.93
SDCBPP3-201ENST00000419629 MSANTD1Q6ZTZ1 278 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms