RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ADCK2Q7Z695 626 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PATL1Q86TB9 770 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CENPSQ8N2Z9 138 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF843Q8N446 348 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM199Q8N511 208 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR51G2Q8NGK0 314 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 NOC3LQ8WTT2 800 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PHYHIPQ92561 330 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 NXNL1Q96CM4 212 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 R3HDM4Q96D70 268 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ANKRD36BP1Q96IX9 119 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ECSITQ9BQ95 431 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF416Q9BWM5 594 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM216Q9P0N5 145 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PURGQ9UJV8 347 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TP53TG5Q9Y2B4 290 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 COL12A1Q99715 3063 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 C15orf38-AP3S2A0A0A6YYH1 394 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A1B0GUA9 196 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ERI2A8K979 691 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 COCHO43405 550 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SNAP91O60641 907 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CST8O60676 142 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SC5DO75845 299 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 HLA-DQA2P01906 255 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CHRM5P08912 532 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 NQO2P16083 231 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 IL1RNP18510 177 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TNFSF8P32971 234 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GLRBP48167 497 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TFPI2P48307 235 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GP2P55259 537 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RAD51Q06609 339 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIAA0040Q15053 153 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SPHARQ15513 63 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 EIF2S3LQ2VIR3 472 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TPRG1LQ5T0D9 272 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MARC1Q5VT66 337 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC35E4Q6ICL7 350 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CYP4Z2PQ8N1L4 340 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 FNDC5Q8NAU1 212 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR52N5Q8NH56 324 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 HM13Q8TCT9 377 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MYLIPQ8WY64 445 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF419Q96HQ0 510 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 FOXC2Q99958 501 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 C11orf70Q9BRQ4 267 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GPR174Q9BXC1 333 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CALN1Q9BXU9 219 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 DUSP21Q9H596 190 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MIEF1Q9NQG6 463 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PIGLQ9Y2B2 252 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SAMHD1Q9Y3Z3 626 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 AKAP13Q12802 2813 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 DYSFO75923 2080 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MAGEB16A2A368 324 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 FABP12A6NFH5 140 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 COLCA2A8K830 154 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 B4DXG7 233 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SSX4O60224 188 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GALR3O60755 368 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF780AO75290 641 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 YEATS4O95619 227 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 APOHP02749 345 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CREB1P16220 341 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 AMPD1P23109 780 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PSMA5P28066 241 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 HMOX2P30519 316 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SSTR4P31391 388 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SYKP43405 635 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MTHFSP49914 203 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 EFNA3P52797 238 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CRYBA2P53672 197 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SPCS3P61009 180 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TPM4P67936 248 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CCL7P80098 99 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RHOGP84095 191 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PMS2P3Q13401 168 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RFX4Q33E94 735 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SBK1Q52WX2 424 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PYCR3Q53H96 274 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 LIPKQ5VXJ0 399 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF776Q68DI1 518 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CASC4Q6P4E1 433 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 UQCC3Q6UW78 93 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 OLFML1Q6UWY5 402 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 C19orf18Q8NEA5 215 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 VN1R2Q8NFZ6 395 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR10Q1Q8NGQ4 319 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR4A16Q8NH70 328 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RNASEH2CQ8TDP1 164 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ST7LQ8TDW4 575 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SMAP2Q8WU79 429 aaPredicted RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GATAD1Q8WUU5 269 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 APOBEC4Q8WW27 367 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SEPT8Q92599 483 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RTP4Q96DX8 246 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms