RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PRAMEF8Q5VWM4 474 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 PRAMEF7Q5VXH5 474 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 CCDC36Q8IYA8 594 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 RFWD2Q8NHY2 731 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 GPR151Q8TDV0 419 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 NRG4Q8WWG1 115 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 LHX4Q969G2 390 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 ECSITQ9BQ95 431 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 NAA11Q9BSU3 229 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 LMF2Q9BU23 707 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 CD274Q9NZQ7 290 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 HAO1Q9UJM8 370 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 SPIN1Q9Y657 262 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 PKHD1P08F94 4074 aa7.36□□□□□ -1.23
UBE2D3-205ENST00000350435 A0A087WV62 115 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 H0YIV9 168 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 GTPBP1O00178 669 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 GSC2O15499 205 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 OIP5O43482 229 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 RSL1D1O76021 490 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 IGHV1-46P01743 117 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 CHRM4P08173 479 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 ZNF250P15622 560 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 SLC6A2P23975 617 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 MDH2P40926 338 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 ARF1P84077 181 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 ZMYND11Q15326 602 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 LIPJQ5W064 366 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 ZNF774Q6NX45 483 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 DHRS4L2Q6PKH6 230 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 PTOV1Q86YD1 416 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 DDIASQ8IXT1 998 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 ZNF101Q8IZC7 436 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 C11orf40Q8WZ69 217 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 MCUR1Q96AQ8 359 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 EXOSC8Q96B26 276 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 TM4SF18Q96CE8 201 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 CADM1Q9BY67 442 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 MRPL1Q9BYD6 325 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 DDX18Q9NVP1 670 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 DCAF16Q9NXF7 216 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 NDE1Q9NXR1 346 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 OPTCQ9UBM4 332 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 C19orf53Q9UNZ5 99 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 SNX24Q9Y343 169 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 HDGFL3Q9Y3E1 203 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 SMAD5-AS1Q9Y6J3 95 aa7.35□□□□□ -1.23
UBE2D3-205ENST00000350435 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 ZNF879B4DU55 563 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 H3BNH8 94 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 ENSAO43768 121 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 EIF1BO60739 113 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 CD79AP11912 226 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 LCN1P31025 176 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 RPL5P46777 297 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 CCR4P51679 360 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 H3F3AP84243 136 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 GLO1Q04760 184 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 MERTKQ12866 999 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 COX10Q12887 443 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 CBFBQ13951 182 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 HEPACAMQ14CZ8 416 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 CPSF6Q16630 551 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 GSG1Q2KHT4 349 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 ARHGAP11BQ3KRB8 267 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 DNAL1Q4LDG9 190 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 PDCD4Q53EL6 469 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 SEL1L2Q5TEA6 688 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 TMEM107Q6UX40 140 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 C4orf22Q6V702 233 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 LINGO2Q7L985 606 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 KLBQ86Z14 1044 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 LINC00482Q8N8I6 264 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 GRK7Q8WTQ7 553 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 NSL1Q96IY1 281 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 AMDHD1Q96NU7 426 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 ZNF385AQ96PM9 386 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 DDOQ99489 341 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 RAB18Q9NP72 206 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 KCNK9Q9NPC2 374 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 TMEM106BQ9NUM4 274 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 MIOXQ9UGB7 285 aa7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 MTO1Q9Y2Z2 717 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 NUP214P35658 2090 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-205ENST00000350435 TCRBV7S3A2A0A539 114 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 TCRBV7S2A1N4TA0A589 114 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 PLSCR5A0PG75 271 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 SMIM23A6NLE4 172 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 K7EPI3 171 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 ETV2O00321 342 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 UPK1AO00322 258 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 GYG2O15488 501 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 UPK3AO75631 287 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 CIB2O75838 187 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 KRT36O76013 467 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 LCKP06239 509 aa7.33□□□□□ -1.24
UBE2D3-205ENST00000350435 HNRNPCP07910 306 aaKnown RBP eCLIP7.33□□□□□ -1.244e-11■■□□□ 14.1
UBE2D3-205ENST00000350435 ZNF26P17031 533 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms