RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MESTQ5EB52 335 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ZBTB49Q6ZSB9 765 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 NOXO1Q8NFA2 376 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TEX47Q8TBZ9 253 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 FNDC8Q8TC99 324 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 MAGEE2Q8TD90 523 aaPredicted RBP12.46□□□□□ -0.41
VPS25-201ENST00000253794 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 Q96M85 177 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ZNF570Q96NI8 536 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 RDH12Q96NR8 316 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 SLC29A1Q99808 456 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TSSK6Q9BXA6 273 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 OPN3Q9H1Y3 402 aaPredicted RBP12.46□□□□□ -0.41
VPS25-201ENST00000253794 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 SLC7A10Q9NS82 523 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ELOVL5Q9NYP7 299 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 IL20RAQ9UHF4 553 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 TRMUO75648 421 aaKnown RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 PPP1R3DO95685 299 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 GRK5P34947 590 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 GIPRP48546 466 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 RAD23AP54725 363 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 RUNX1T1Q06455 604 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 P2RY6Q15077 328 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 ZNF362Q5T0B9 420 aaPredicted RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 SLC27A4Q6P1M0 643 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 OR4Q3Q8NH05 313 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 HDAC2Q92769 488 aaKnown RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 IFT27Q9BW83 186 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 GLTPQ9NZD2 209 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 VSX1Q9NZR4 365 aaPredicted RBP12.45□□□□□ -0.42
VPS25-201ENST00000253794 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 IER3IP1Q9Y5U9 82 aa12.45□□□□□ -0.42
VPS25-201ENST00000253794 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 ZAR1LA6NP61 321 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 EEF1E1-BLOC1S5C9J1V9 151 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 H3BN98 237 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 EEF1E1O43324 174 aaKnown RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 UPK3AO75631 287 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS25-201ENST00000253794 ATP6V1G2O95670 118 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 RNF224P0DH78 156 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 PSMB1P20618 241 aaKnown RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 PEX2P28328 305 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 ACVR1BP36896 505 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 CSNK1A1P48729 337 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 NPRL3Q12980 569 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 CAMK2DQ13557 499 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 PGGHGQ32M88 737 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 CLEC12AQ5QGZ9 265 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 C10orf128Q5T292 105 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 DDOQ99489 341 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 OR10A4Q9H209 315 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 B3GAT2Q9NPZ5 323 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 CMC2Q9NRP2 79 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 ASB6Q9NWX5 421 aa12.44□□□□□ -0.42
VPS25-201ENST00000253794 KLF2Q9Y5W3 355 aaPredicted RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
VPS25-201ENST00000253794 ADGRG4Q8IZF6 3080 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 SLC22A23A1A5C7 686 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ZNF587BE7ETH6 402 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 DLGAP1O14490 977 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 XKRYO14609 159 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 MPGP29372 298 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 CD79BP40259 229 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 SH3BGRP55822 239 aaPredicted RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 CLRN1P58418 232 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 SORDQ00796 357 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ITGADQ13349 1161 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 GINS1Q14691 196 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 PTGES3Q15185 160 aaKnown RBP12.43□□□□□ -0.42
VPS25-201ENST00000253794 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 THEM4Q5T1C6 240 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 LPCAT4Q643R3 524 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ACSM5Q6NUN0 579 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 LRFN4Q6PJG9 635 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 PTCHD4Q6ZW05 846 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 LINGO2Q7L985 606 aa12.43□□□□□ -0.42
VPS25-201ENST00000253794 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms