RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 ISL1P61371 349 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 IL5RAQ01344 420 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 LGALS3BPQ08380 585 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TMED1Q13445 227 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MAD2L1BPQ15013 274 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 STK11Q15831 433 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 C3AR1Q16581 482 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 OCLNQ16625 522 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM201Q5SNT2 666 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 NXNL2Q5VZ03 156 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 DNM1P34Q6PK57 102 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 IGFN1Q86VF2 1251 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 GID4Q8IVV7 300 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 KDM8Q8N371 416 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 OR52E2Q8NGJ4 325 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 OR5M9Q8NGP3 310 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 ABHD3Q8WU67 409 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MED12Q93074 2177 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF566Q969W8 418 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 RELTQ969Z4 430 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 RBP7Q96R05 134 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TRIB1Q96RU8 372 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 YTHDF1Q9BYJ9 559 aaKnown RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 VSX1Q9NZR4 365 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TNFRSF10DQ9UBN6 386 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MOKQ9UQ07 419 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MGAQ8IWI9 3026 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SPTA1P02549 2419 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 PRSS37A4D1T9 235 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 PRR23D1E9PI22 279 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 PRODHO43272 600 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 TLX2O43763 284 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 RAMP1O60894 148 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SLC43A1O75387 559 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 MRPL33O75394 65 aaKnown RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 AQP8O94778 261 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 CNOT4O95628 575 aaKnown RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 IL2RAP01589 272 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 PRR23D2P0DMB1 279 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 HLA-DOBP13765 273 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 GABRB1P18505 474 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 BIDP55957 195 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 TOP3AQ13472 1001 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 PRR30Q53SZ7 412 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SLC35D3Q5M8T2 416 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF362Q5T0B9 420 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 THEM4Q5T1C6 240 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SLC35F1Q5T1Q4 408 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM211Q6ICI0 200 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 B3GNT6Q6ZMB0 384 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 AAED1Q7RTV5 226 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 CD163Q86VB7 1156 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 DOLPP1Q86YN1 238 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 CCDC71Q8IV32 467 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 ENTHD1Q8IYW4 607 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 TCEANCQ8N8B7 351 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 ZIC4Q8N9L1 334 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 POMGNT2Q8NAT1 580 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 SLC37A3Q8NCC5 494 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 NPEPL1Q8NDH3 523 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 OR2T4Q8NH00 348 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 OR4K13Q8NH42 304 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 KCNK17Q96T54 332 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 DDOQ99489 341 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 MRPL13Q9BYD1 178 aaKnown RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 LINC00470Q9BZP3 86 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 B3GAT2Q9NPZ5 323 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 MED29Q9NX70 200 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 ING1Q9UK53 422 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 RNF6Q9Y252 685 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 NOSIPQ9Y314 301 aaKnown RBP10.36□□□□□ -0.75
TARDBP-217ENST00000616545 EMC9Q9Y3B6 208 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 FKBP7Q9Y680 259 aa10.36□□□□□ -0.75
TARDBP-217ENST00000616545 LOC400499M0QZD8 3231 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CACNA1BQ00975 2339 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 IRGMA1A4Y4 181 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 SLC22A23A1A5C7 686 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 KDM4EB2RXH2 506 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ARHGEF9O43307 516 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 PRKYO43930 277 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 TRMUO75648 421 aaKnown RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 SERPINI2O75830 405 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF432O94892 652 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 TGM6O95932 706 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 GNAO1P09471 354 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 KLK2P20151 261 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CDKN2AP42771 156 aaKnown RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 MLLT10P55197 1068 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CLRN1P58418 232 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CD47Q08722 323 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms