RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 DMRTC1Q5HYR2 192 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 SLC25A34Q6PIV7 304 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 CASC1Q6TDU7 716 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 FAM92BQ6ZTR7 304 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 PIANPQ8IYJ0 282 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 UBALD2Q8IYN6 164 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 YY1AP1Q9H869 796 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF629Q9UEG4 869 aaPredicted RBP2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 WIF1Q9Y5W5 379 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 PLA2R1Q13018 1463 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF705GA8MUZ8 300 aaPredicted RBP2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 INS-IGF2F8WCM5 200 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 K7EPI3 171 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 ANGPT2O15123 496 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 HMMRO75330 724 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 UPK3AO75631 287 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 UBTFL1P0CB47 393 aaPredicted RBP2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF14P17017 642 aaPredicted RBP2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 OPRD1P41143 372 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 CHRFAM7AQ494W8 412 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 KRTAP13-2Q52LG2 175 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 ARL6IP6Q8N6S5 226 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 OR10G4Q8NGN3 311 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 PYROXD1Q8WU10 500 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 RLN3Q8WXF3 142 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 SMARCD2Q92925 531 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 EMG1Q92979 244 aaKnown RBP2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 BFARQ9NZS9 450 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 MARCOQ9UEW3 520 aaPredicted RBP2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF222Q9UK12 451 aa2.59□□□□□ -1.99
SCAMP1-205ENST00000614488 TRAV40A0A0B4J280 105 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 METTL21EPA6NDL7 271 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 TRIM64CA6NLI5 447 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 ARPC3O15145 178 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 B3GALNT1O75752 331 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 IQCF3P0C7M6 154 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 CELP19835 753 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 NPY1RP25929 384 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 CCR1P32246 355 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 DUSP3P51452 185 aaPredicted RBP2.58□□□□□ -2
SCAMP1-205ENST00000614488 PLD1Q13393 1074 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 STK11Q15831 433 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 NUDCD3Q8IVD9 361 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 OR2T34Q8NGX1 318 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 OR5W2Q8NH69 310 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 PHF10Q8WUB8 498 aaKnown RBP2.58□□□□□ -2
SCAMP1-205ENST00000614488 DTNBP1Q96EV8 351 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 WFIKKN1Q96NZ8 548 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 TSSK3Q96PN8 268 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 GGA2Q9UJY4 613 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 PACSIN2Q9UNF0 486 aaPredicted RBP2.58□□□□□ -2
SCAMP1-205ENST00000614488 KCNIP3Q9Y2W7 256 aa2.58□□□□□ -2
SCAMP1-205ENST00000614488 A0A1W2PP18 115 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 CPLX1O14810 134 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 RCBTB2O95199 551 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 DCNP07585 359 aaKnown RBP2.57□□□□□ -2
SCAMP1-205ENST00000614488 TCN1P20061 433 aaPredicted RBP2.57□□□□□ -2
SCAMP1-205ENST00000614488 GDI1P31150 447 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 SOX6P35712 828 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 GPR6P46095 362 aaPredicted RBP2.57□□□□□ -2
SCAMP1-205ENST00000614488 NPBWR2P48146 333 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 SUB1P53999 127 aaKnown RBP eCLIP2.57□□□□□ -2
SCAMP1-205ENST00000614488 AQP6Q13520 282 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 FILIP1LQ4L180 1135 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 XKR4Q5GH76 650 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 FBXW9Q5XUX1 488 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 GALNT17Q6IS24 598 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 ZNF880Q6PDB4 577 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 ZNF679Q8IYX0 411 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 MFSD9Q8NBP5 474 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 SYNPRQ8TBG9 265 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 C16orf45Q96MC5 204 aaPredicted RBP2.57□□□□□ -2
SCAMP1-205ENST00000614488 OSBPL11Q9BXB4 747 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 PARD6BQ9BYG5 372 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 RAB33BQ9H082 229 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 RABL2BQ9UNT1 228 aa2.57□□□□□ -2
SCAMP1-205ENST00000614488 IGLV3-22A0A075B6J6 115 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 A0A1B0GVX0 72 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 H0YHG0 523 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 MGRN1O60291 552 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 SMPD2O60906 423 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 GAPDHP04406 335 aaKnown RBP2.56□□□□□ -2
SCAMP1-205ENST00000614488 FGF1P05230 155 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 HSPA5P11021 654 aaKnown RBP2.56□□□□□ -2
SCAMP1-205ENST00000614488 NCBP2P52298 156 aaKnown RBP eCLIP2.56□□□□□ -2
SCAMP1-205ENST00000614488 SLC7A9P82251 487 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 ELP6Q0PNE2 266 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 PRSS8Q16651 343 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 DGUOKQ16854 277 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 COX19Q49B96 90 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 CNIH2Q6PI25 160 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 SHISA6Q6ZSJ9 500 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 NEGR1Q7Z3B1 354 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 PEX26Q7Z412 305 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 MYOCDQ8IZQ8 938 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 TEX9Q8N6V9 391 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 MAGEE2Q8TD90 523 aaPredicted RBP2.56□□□□□ -2
SCAMP1-205ENST00000614488 GEMIN6Q8WXD5 167 aaKnown RBP2.56□□□□□ -2
SCAMP1-205ENST00000614488 THRSPQ92748 146 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 SLC38A2Q96QD8 506 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms