RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 J3KTA2 159 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 OVOL3O00110 214 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 SERPINI2O75830 405 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 PRSS23O95084 383 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 SOD3P08294 240 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 HSD17B1P14061 328 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 CD99P14209 185 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 BIDP55957 195 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.539e-6■□□□□ 8.7
ARHGEF1-222ENST00000600517 CAMK2DQ13557 499 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 TRAM2Q15035 370 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 PGGHGQ32M88 737 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 PRSS57Q6UWY2 283 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 ZNF627Q7L945 461 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 CCDC36Q8IYA8 594 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 WFDC11Q8NEX6 87 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 OR6N1Q8NGY5 312 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 TMEM54Q969K7 222 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 FNDC11Q9BVV2 318 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 CXorf56Q9H5V9 222 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 MOV10Q9HCE1 1003 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 NDE1Q9NXR1 346 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 RHCGQ9UBD6 479 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 CRNNQ9UBG3 495 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 ENPP4Q9Y6X5 453 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 ACANP16112 2415 aa11.76□□□□□ -0.53
ARHGEF1-222ENST00000600517 ZNF99A8MXY4 864 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 E7EQL1 145 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 GMNNO75496 209 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 BCL10O95999 233 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 PTH2RP49190 550 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 CDH11P55287 796 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 RPS4XP62701 263 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 RPL18Q07020 188 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 FOXD4Q12950 439 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SPATS1Q496A3 300 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SAMD4BQ5PRF9 694 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 C16orf89Q6UX73 402 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 RNF113BQ8IZP6 322 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 FAM156AQ8NDB6 213 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 BPIFA2Q96DR5 249 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SLC25A44Q96H78 314 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 C7orf34Q96L11 122 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 ULBP2Q9BZM5 246 aa11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 NMNAT1Q9HAN9 279 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SAMD4AQ9UPU9 718 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-222ENST00000600517 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 ALPK2Q86TB3 2170 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 A0A087WUU8 490 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 IGHV1-18A0A0C4DH31 117 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 CD8AP01732 235 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 F13BP05160 661 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 IFI30P13284 250 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 FOSL1P15407 271 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 CBR1P16152 277 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 MAKP20794 623 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 TTKP33981 857 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 MSX2P35548 267 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 AQP2P41181 271 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 TUBA1BP68363 451 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 TUBA4AP68366 448 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 PRKCDQ05655 676 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 HIST3H3Q16695 136 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 Q5PR19 223 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 LRFN4Q6PJG9 635 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 TUBA1AQ71U36 451 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 DTX2Q86UW9 622 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 CYP4Z1Q86W10 505 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 MOSPD2Q8NHP6 518 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 ACOT11Q8WXI4 607 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 PERPQ96FX8 193 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 NSL1Q96IY1 281 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 SLC38A2Q96QD8 506 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 SEPHS2Q99611 448 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 DHRS9Q9BPW9 319 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 TRAF4Q9BUZ4 470 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 ANKRD19PQ9H560 264 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 DLL4Q9NR61 685 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 INIPQ9NRY2 104 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 B3GNT2Q9NY97 397 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 GLTPQ9NZD2 209 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 NDUFAF4Q9P032 175 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 POU2F3Q9UKI9 436 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 ADAM21Q9UKJ8 722 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
ARHGEF1-222ENST00000600517 HIF3AQ9Y2N7 669 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms