RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ATP5J2P56134 94 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 HIST3H2AQ7L7L0 130 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 FAM169BQ8N8A8 192 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 OR6X1Q8NH79 312 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 LIPHQ8WWY8 451 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 HIST1H2ACQ93077 130 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 PRRC1Q96M27 445 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 SLC38A2Q96QD8 506 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 DHRS9Q9BPW9 319 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 KCTD14Q9BQ13 255 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 GSX1Q9H4S2 264 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 MAN2C1Q9NTJ4 1040 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 MOKQ9UQ07 419 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 ARL2BPQ9Y2Y0 163 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 BLOC1S5-TXNDC5H3BN57 136 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 SEC14L2O76054 403 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ZNF682O95780 498 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 SERPINA1P01009 418 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 IGKV3-15P01624 115 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 UMPSP11172 480 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 PAX7P23759 505 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ST3GAL3Q11203 375 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 C3orf36Q3SXR2 165 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 C11orf71Q6IPW1 123 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ZNF627Q7L945 461 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 TSEN54Q7Z6J9 526 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 DEPDC4Q8N2C3 294 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 CIARTQ8N365 385 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 GEMIN6Q8WXD5 167 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 TMEM54Q969K7 222 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 SGTBQ96EQ0 304 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 C18orf12Q96KH6 178 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ADAD1Q96M93 576 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 SPAG4Q9NPE6 437 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 FAIMQ9NVQ4 179 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 MED31Q9Y3C7 131 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 C2CD3Q4AC94 2353 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ZANQ9Y493 2812 aa16.1■□□□□ 0.17
SHKBP1-202ENST00000593764 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 PRSS23O95084 383 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 IFNW1P05000 195 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 CBR1P16152 277 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 RPL18Q07020 188 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 MELKQ14680 651 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 IFI44LQ53G44 452 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 AGAP6Q5VW22 663 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 LRFN4Q6PJG9 635 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 NANOGNBQ7Z5D8 188 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 MYPOPQ86VE0 399 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 OR6N1Q8NGY5 312 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 GTPBP3Q969Y2 492 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 HSH2DQ96JZ2 352 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 SEC61A2Q9H9S3 476 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 B3GAT2Q9NPZ5 323 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 B3GNT2Q9NY97 397 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 RHCGQ9UBD6 479 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 EGFL7Q9UHF1 273 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 ATP23Q9Y6H3 246 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 NF1P21359 2839 aa16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 NIPBLQ6KC79 2804 aaeCLIP16.09■□□□□ 0.17
SHKBP1-202ENST00000593764 TRIM64A6NGJ6 449 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 TRIM64BA6NI03 449 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 PIP5K1CO60331 668 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 NDUFS7O75251 213 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 F13BP05160 661 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 CELA3BP08861 270 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 CECR9P0C854 216 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 AQP2P41181 271 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 CSNK1A1P48729 337 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 RUNX1T1Q06455 604 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 LAPTM4AQ15012 233 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 FKBP9P1Q75LS8 142 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 CCDC36Q8IYA8 594 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 OFCC1Q8IZS5 231 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 MUC15Q8N387 334 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 RNF148Q8N7C7 305 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 RBM15BQ8NDT2 890 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 FAM162AQ96A26 154 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 TRMT61AQ96FX7 289 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 SLC25A44Q96H78 314 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 LRRC37BQ96QE4 947 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 SMR3AQ99954 134 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 ULBP2Q9BZM5 246 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 CBLN4Q9NTU7 201 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 GLTPQ9NZD2 209 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 ADA2Q9NZK5 511 aa16.08■□□□□ 0.16
SHKBP1-202ENST00000593764 BCL10O95999 233 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 INHBBP09529 407 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 PGA4P0DJD7 388 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 PGA3P0DJD8 388 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 CALCRP30988 508 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 FABP6P51161 128 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 NAAAQ02083 359 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 GLYATQ6IB77 296 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF813Q6ZN06 617 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms