RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MRPL24Q96A35 216 aaKnown RBP11.82□□□□□ -0.52
HDAC5-208ENST00000588419 SPDL1Q96EA4 605 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MOGAT1Q96PD6 335 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 FOXB1Q99853 325 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 RSPO3Q9BXY4 272 aaPredicted RBP11.82□□□□□ -0.52
HDAC5-208ENST00000588419 OR51B6Q9H340 312 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 TCF7L2Q9NQB0 619 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 SPEF1Q9Y4P9 236 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 M0R3H8 397 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 SYNGR3O43761 229 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 RGS9O75916 674 aaPredicted RBP11.81□□□□□ -0.52
HDAC5-208ENST00000588419 OPN1SWP03999 348 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
HDAC5-208ENST00000588419 TACSTD2P09758 323 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 PATE4P0C8F1 98 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 ADORA3P0DMS8 318 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 HOXB9P17482 250 aaPredicted RBP11.81□□□□□ -0.52
HDAC5-208ENST00000588419 NR4A1P22736 598 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 SLC6A2P23975 617 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 LSP1P33241 339 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
HDAC5-208ENST00000588419 GIPRP48546 466 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 CSNK1A1P48729 337 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 SEC24CP53992 1094 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 CDH15P55291 814 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 BIDP55957 195 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 MELKQ14680 651 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 PAGE3Q5JUK9 113 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 FAM91A1Q658Y4 838 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 ARMC8Q8IUR7 673 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 CCDC36Q8IYA8 594 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 SMYD1Q8NB12 490 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 IL17RDQ8NFM7 739 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 ZNF607Q96SK3 696 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 EBF4Q9BQW3 602 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 VAPAQ9P0L0 249 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 MYEF2Q9P2K5 600 aaKnown RBP11.81□□□□□ -0.52
HDAC5-208ENST00000588419 DUSP13Q9UII6 198 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 ANGPT4Q9Y264 503 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 CORINQ9Y5Q5 1042 aa11.81□□□□□ -0.52
HDAC5-208ENST00000588419 A0A0B4J2E0 115 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 A0A1B0GX12 115 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 PRORSD1PA6NEY8 169 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 CPSF4LA6NMK7 179 aaKnown RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 KPNA4O00629 521 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 UBL3O95164 117 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 OR6A2O95222 327 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 HPXP02790 462 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 ZNF14P17017 642 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 PPIBP23284 216 aaKnown RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 CDH12P55289 794 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 RAB1AP62820 205 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 RIN1Q13671 783 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 RAB39AQ14964 217 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 AGKQ53H12 422 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 GLCCI1Q86VQ1 547 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 SCAIQ8N9R8 606 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 ICA1LQ8NDH6 482 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 HPS1Q92902 700 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 MCHR1Q99705 422 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 WFDC6Q9BQY6 131 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 IKZF5Q9H5V7 419 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 METTL17Q9H7H0 456 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-208ENST00000588419 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 DYSFO75923 2080 aa11.8□□□□□ -0.52
HDAC5-208ENST00000588419 EVPLLA8MZ36 301 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 FZD7O75084 574 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 SERPINB7O75635 380 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 FAM157BP0CG42 384 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 UMPSP11172 480 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 NAT2P11245 290 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 RPS23P62266 143 aaKnown RBP11.79□□□□□ -0.52
HDAC5-208ENST00000588419 CYP51A1Q16850 503 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 NKPD1Q17RQ9 610 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 ELFN2Q5R3F8 820 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 SHQ1Q6PI26 577 aaKnown RBP11.79□□□□□ -0.52
HDAC5-208ENST00000588419 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 CARM1Q86X55 608 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 HIPK4Q8NE63 616 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 OR5J2Q8NH18 312 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 LRRC8CQ8TDW0 803 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 SLC41A3Q96GZ6 507 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 TMBIM4Q9HC24 238 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 SLCO1B3Q9NPD5 702 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 MRPL39Q9NYK5 338 aaKnown RBP11.79□□□□□ -0.52
HDAC5-208ENST00000588419 ZNF224Q9NZL3 707 aa11.79□□□□□ -0.52
HDAC5-208ENST00000588419 CORO2BQ9UQ03 480 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms