RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KDM4DQ6B0I6 523 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-225ENST00000569245 RRM2BQ7LG56 351 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 TMEM99Q8N816 258 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 ATG16L2Q8NAA4 619 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 MAGEE2Q8TD90 523 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-225ENST00000569245 DNAJC9Q8WXX5 260 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 MBD6Q96DN6 1003 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 FEVQ99581 238 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 SMURF2Q9HAU4 748 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 NGBQ9NPG2 151 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 PARPBPQ9NWS1 579 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 MGAT4BQ9UQ53 548 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 MED31Q9Y3C7 131 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 CIB4A0PJX0 185 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 GASTP01350 101 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 IGHV1-2P23083 117 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 GTF2E2P29084 291 aaKnown RBP12.77□□□□□ -0.37
COMMD4-225ENST00000569245 RPS5P46782 204 aaKnown RBP12.77□□□□□ -0.37
COMMD4-225ENST00000569245 OMPP47874 163 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 PRKCDQ05655 676 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 TAB1Q15750 504 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 ACKR1Q16570 336 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 RFX4Q33E94 735 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 CD300LDQ6UXZ3 194 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 ZER1Q7Z7L7 766 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 NRMQ8IXM6 262 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 GALNT4Q8N4A0 578 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 MUCL1Q96DR8 90 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-225ENST00000569245 ASB6Q9NWX5 421 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 TMEFF2Q9UIK5 374 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-225ENST00000569245 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.37
COMMD4-225ENST00000569245 HIVEP1P15822 2718 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 IGKV1D-42A0A075B6H8 117 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 AQP7P3A6NL99 342 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 DLGAP1O14490 977 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 CD53P19397 219 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 NTF4P34130 210 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 GSSP48637 474 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 AQP4P55087 323 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 EGR4Q05215 589 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 FAPQ12884 760 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 COX10Q12887 443 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 SLC17A1Q14916 467 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 C5orf46Q6UWT4 87 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 IZUMO2Q6UXV1 221 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF704Q6ZNC4 412 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 TMPRSS11FQ6ZWK6 438 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 AAED1Q7RTV5 226 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 OR9K2Q8NGE7 335 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 GNPDA2Q8TDQ7 276 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 CCL19Q99731 98 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 SF3B5Q9BWJ5 86 aaKnown RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 CXXC4Q9H2H0 198 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 ESRP2Q9H6T0 727 aaKnown RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF556Q9HAH1 456 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 MEPEQ9NQ76 525 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 BEX4Q9NWD9 120 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 SMPD3Q9NY59 655 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 KIF17Q9P2E2 1029 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 TMEM5Q9Y2B1 443 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 POFUT2Q9Y2G5 429 aa12.76□□□□□ -0.37
COMMD4-225ENST00000569245 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
COMMD4-225ENST00000569245 PIP5K1CO60331 668 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 NPIPB7O75200 414 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 RAD51DO75771 328 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 KRT33AO76009 404 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 CD3EP07766 207 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 GSTM3P21266 225 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 IGFBP5P24593 272 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 FPR3P25089 353 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-225ENST00000569245 HSPA13P48723 471 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 RAD23AP54725 363 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 IL1RL1Q01638 556 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 TSPAN31Q12999 210 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 PPA1Q15181 289 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 C20orf204Q6ZNR8 217 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 P3H2Q8IVL5 708 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 CDK20Q8IZL9 346 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 PARP8Q8N3A8 854 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF433Q8N7K0 673 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-225ENST00000569245 PFN4Q8NHR9 129 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 MFSD8Q8NHS3 518 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 PIGTQ969N2 578 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 KTI12Q96EK9 354 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-225ENST00000569245 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms