RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 THBS4P35443 961 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 ARR3P36575 388 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 CSNK1A1P48729 337 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 GZMMP51124 257 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 ARFIP2P53365 341 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 HGFACQ04756 655 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 TMEM249Q2WGJ8 235 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 C3orf36Q3SXR2 165 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 REP15Q6BDI9 236 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 LINC00114Q6XXX2 140 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 PXKQ7Z7A4 578 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 LRRC17Q8N6Y2 441 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 OR4F15Q8NGB8 312 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 TNFRSF13CQ96RJ3 184 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 ECSITQ9BQ95 431 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 SH3GLB1Q9Y371 365 aa14.91□□□□□ -0.02
GPHN-211ENST00000556020 ANK3Q12955 4377 aaKnown RBP14.91□□□□□ -0.02
GPHN-211ENST00000556020 IGHV2OR16-5A0A0B4J2B6 119 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 A8MV72 311 aaPredicted RBP14.9□□□□□ -0.02
GPHN-211ENST00000556020 B9A039 149 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 RNF13O43567 381 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
GPHN-211ENST00000556020 CSF3P09919 207 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 TNFRSF1BP20333 461 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 KLF10Q13118 480 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 ZNF74Q16587 644 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 KRT80Q6KB66 452 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 DEF8Q6ZN54 512 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 SLC35D2Q76EJ3 337 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 SNX32Q86XE0 403 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 SVOPLQ8N434 492 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 PROX1Q92786 737 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 LRRC58Q96CX6 371 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 LRR1Q96L50 414 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 SH3GL1Q99961 368 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 NOX3Q9HBY0 568 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 NANSQ9NR45 359 aa14.9□□□□□ -0.02
GPHN-211ENST00000556020 YLPM1P49750 1951 aaKnown RBP14.9□□□□□ -0.02
GPHN-211ENST00000556020 LOC100653049A0A140TA62 436 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 hCG_2039718K7EN88 272 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 FXYD1O00168 92 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 SHOX2O60902 331 aaPredicted RBP14.89□□□□□ -0.03
GPHN-211ENST00000556020 KRT34O76011 436 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 HIST1H2ABP04908 130 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 NPR2P20594 1047 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 PTDSS1P48651 473 aaKnown RBP14.89□□□□□ -0.03
GPHN-211ENST00000556020 PDLIM4P50479 330 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 CRYBA2P53672 197 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 LOXL1Q08397 574 aaPredicted RBP14.89□□□□□ -0.03
GPHN-211ENST00000556020 SNTB2Q13425 540 aaKnown RBP14.89□□□□□ -0.03
GPHN-211ENST00000556020 DAG1Q14118 895 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 GGTLC2Q14390 218 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 MELKQ14680 651 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 GSG1Q2KHT4 349 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 CGB2Q6NT52 195 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 NHLRC1Q6VVB1 395 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 HIST3H2AQ7L7L0 130 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 SPATA21Q7Z572 469 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 CARM1Q86X55 608 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 CCDC36Q8IYA8 594 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 NUP37Q8NFH4 326 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 RASSF5Q8WWW0 418 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 HIST1H2ACQ93077 130 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 FOXB1Q99853 325 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 SAR1AQ9NR31 198 aa14.89□□□□□ -0.03
GPHN-211ENST00000556020 SH3PXD2BA1X283 911 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 VSTM5A8MXK1 200 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 PDE5AO76074 875 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 USF1P22415 310 aaPredicted RBP14.88□□□□□ -0.03
GPHN-211ENST00000556020 TAS2R41P59536 307 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 MAPRE2Q15555 327 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 EFNB3Q15768 340 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 C6orf52Q5T4I8 152 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 CCDC80Q76M96 950 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 NANOGNBQ7Z5D8 188 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 CALHM3Q86XJ0 350 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 OR8J3Q8NGG0 315 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 MPP4Q96JB8 637 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 MDFIQ99750 246 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 PIMREGQ9BSJ6 248 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 PLK3Q9H4B4 646 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 B3GNT2Q9NY97 397 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 TAS2R5Q9NYW4 299 aa14.88□□□□□ -0.03
GPHN-211ENST00000556020 BLOC1S5-TXNDC5H3BN57 136 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 RAB36O95755 333 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 PATE4P0C8F1 98 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 ZNF16P17020 682 aaPredicted RBP14.87□□□□□ -0.03
GPHN-211ENST00000556020 OR1E2P47887 323 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 GIPRP48546 466 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 GUCY1A3Q02108 690 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 LRRC23Q53EV4 343 aaPredicted RBP14.87□□□□□ -0.03
GPHN-211ENST00000556020 ZCCHC24Q8N2G6 241 aaKnown RBP14.87□□□□□ -0.03
GPHN-211ENST00000556020 PFN4Q8NHR9 129 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 C10orf82Q8WW14 230 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 PRSS27Q9BQR3 290 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 ZNF442Q9H7R0 627 aa14.87□□□□□ -0.03
GPHN-211ENST00000556020 DYNLRB1Q9NP97 96 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms