RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 HBEGFQ99075 208 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 PAPOLGQ9BWT3 736 aaKnown RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 LIN7BQ9HAP6 207 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NLKQ9UBE8 527 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FOXJ3Q9UPW0 622 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CSNK1G3Q9Y6M4 447 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 A0A087WUU8 490 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 FAM90A27PA6NNH2 459 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 GBAP04062 536 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SERPINE2P07093 398 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CNR1P21554 472 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TNFSF8P32971 234 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TPMTP51580 245 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 RAB4BP61018 213 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF529Q6P280 563 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF322Q6U7Q0 402 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF620Q6ZNG0 422 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 KANSL1Q7Z3B3 1105 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CATSPERDQ86XM0 798 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CPOQ8IVL8 374 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 KCNRGQ8N5I3 272 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR52R1Q8NGF1 315 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ARRDC2Q8TBH0 407 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CDS1Q92903 461 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 RSPRY1Q96DX4 576 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 P2RY12Q9H244 342 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TRAV1-2A0A0B4J238 106 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 GABARAPH6UMI1 98 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 LINC01387J3KSC0 135 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 PTGESO14684 152 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ELAVL4P26378 380 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CCR9P51686 369 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SFXN4Q6P4A7 337 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 Q6ZVL8 140 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM25Q86YD3 366 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 VRK3Q8IV63 474 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TCTE3Q8IZS6 198 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 C19orf47Q8N9M1 422 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR2A12Q8NGT7 310 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR2A14Q96R47 310 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 MENTQ9BUN1 341 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF355PQ9NSJ1 428 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SERINC4A6NH21 518 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 C11orf98E9PRG8 122 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ACOT8O14734 319 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 EIF4EP06730 217 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 PSMB1P20618 241 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 MLLT10P55197 1068 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 MS4A2Q01362 244 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 FRMPD2BQ6IN97 320 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 FAM71E1Q6IPT2 247 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CD163Q86VB7 1156 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 FUNDC1Q8IVP5 155 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF679Q8IYX0 411 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 APCDD1Q8J025 514 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SDR9C7Q8NEX9 313 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR52E1Q8NGJ3 308 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR6K3Q8NGY3 331 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SLC7A6Q92536 515 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 HAS2Q92819 552 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ENKD1Q9H0I2 346 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 IL26Q9NPH9 171 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TAAR2Q9P1P5 351 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ERRFI1Q9UJM3 462 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 FEZF1A0PJY2 475 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 K7EQM0 130 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SCO2O43819 266 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 TACR1P25103 407 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 LUMP51884 338 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SEC61A1P61619 476 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SNRPD2P62316 118 aaKnown RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 IL13RA1P78552 427 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 SPCS2Q15005 226 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 PLCXD3Q63HM9 321 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 CARFQ8N187 725 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 PRSS35Q8N3Z0 413 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR52I1Q8NGK6 324 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 OR4K13Q8NH42 304 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF583Q96ND8 569 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF649Q9BS31 505 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 RIMS4Q9H426 269 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-211ENST00000543710 IER3IP1Q9Y5U9 82 aa7.22□□□□□ -1.25
VPS13D-211ENST00000543710 MSTNO14793 375 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ADRA2CP18825 462 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 M6PRP20645 277 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 GPR3P46089 330 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 GNB2P62879 340 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 SIRPAP78324 504 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 HTRA4P83105 476 aaPredicted RBP7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF616Q08AN1 781 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 DOC2BQ14184 412 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF74Q16587 644 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 NHSL2Q5HYW2 709 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 C15orf54Q8N8G6 183 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 SEMA6DQ8NFY4 1073 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 OR4K15Q8NH41 348 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 GNPNAT1Q96EK6 184 aaPredicted RBP7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF764Q96H86 408 aaPredicted RBP7.21□□□□□ -1.25
VPS13D-211ENST00000543710 FGF20Q9NP95 211 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms