RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SH3D21A4FU49 640 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 ZNF587BE7ETH6 402 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 PTP4A3O75365 173 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 DEAF1O75398 565 aaPredicted RBP17.12■□□□□ 0.33
DDX55-207ENST00000540763 SERPINI2O75830 405 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 KRT33AO76009 404 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 IGHV3-9P01782 118 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 F13BP05160 661 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 ITGA5P08648 1049 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 IL32P24001 234 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 SH3BGRP55822 239 aaPredicted RBP17.12■□□□□ 0.33
DDX55-207ENST00000540763 BIDP55957 195 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 TGFBR3Q03167 851 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 TSPAN31Q12999 210 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 LAPTM4AQ15012 233 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 MICAQ29983 383 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 OR7E24Q6IFN5 339 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 P2RY8Q86VZ1 359 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 C20orf196Q8IYI0 205 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 C17orf78Q8N4C9 275 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 OR51A7Q8NH64 312 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 ASB10Q8WXI3 467 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 SLC25A44Q96H78 314 aaPredicted RBP17.12■□□□□ 0.33
DDX55-207ENST00000540763 TXNDC15Q96J42 360 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 TNFRSF13CQ96RJ3 184 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 ACTR6Q9GZN1 396 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 MCCC2Q9HCC0 563 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 B3GAT2Q9NPZ5 323 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 PKDREJQ9NTG1 2253 aa17.12■□□□□ 0.33
DDX55-207ENST00000540763 UNC119BA6NIH7 251 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 MCIDASD6RGH6 385 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 GNGT2O14610 69 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 NDUFB2O95178 105 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 EPXP11678 715 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 FCGR1AP12314 374 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 DNAJA1P31689 397 aaKnown RBP17.11■□□□□ 0.33
DDX55-207ENST00000540763 ACKR1Q16570 336 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 RPL13AP3Q6NVV1 102 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 BHLHA15Q7RTS1 189 aaPredicted RBP17.11■□□□□ 0.33
DDX55-207ENST00000540763 MEX3DQ86XN8 651 aaKnown RBP17.11■□□□□ 0.33
DDX55-207ENST00000540763 GPR137CQ8N3F9 429 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 C14orf79Q96F83 325 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 ALKBH3Q96Q83 286 aaPredicted RBP17.11■□□□□ 0.33
DDX55-207ENST00000540763 GPA33Q99795 319 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 EMC6Q9BV81 110 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 DGCR6LQ9BY27 220 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 CRIM1Q9NZV1 1036 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 AP4S1Q9Y587 144 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 U3KQV3 271 aa17.11■□□□□ 0.33
DDX55-207ENST00000540763 UPK3AO75631 287 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 LYZL6O75951 148 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 IGHG1P01857 330 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 CD14P08571 375 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 PGA4P0DJD7 388 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 PGA3P0DJD8 388 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 NR2C1P13056 603 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ERFP50548 548 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 CTXN1P60606 82 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 RPL27P61353 136 aaKnown RBP17.1■□□□□ 0.33
DDX55-207ENST00000540763 CAMK2DQ13557 499 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 MELKQ14680 651 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ZSCAN26Q16670 478 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 TIMM23BQ5SRD1 257 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ARMC4Q5T2S8 1044 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ZFP1Q6P2D0 407 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 SMARCD3Q6STE5 483 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 OR9Q2Q8NGE9 314 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 TMEM54Q969K7 222 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ZNF566Q969W8 418 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 NRBF2Q96F24 287 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 MED18Q9BUE0 208 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ZNF226Q9NYT6 803 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 MGAT4BQ9UQ53 548 aa17.1■□□□□ 0.33
DDX55-207ENST00000540763 ALPK2Q86TB3 2170 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 LRBAP50851 2863 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 APEHP13798 732 aaKnown RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 ZNF26P17031 533 aaPredicted RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 GSTM3P21266 225 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 CSNK1A1P48729 337 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 FXYD6P3P58550 94 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 ROR2Q01974 943 aaKnown RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 KPNB1Q14974 876 aaKnown RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 DAZAP2Q15038 168 aaPredicted RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 ATP6AP1Q15904 470 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 HMBOX1Q6NT76 420 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 LINGO2Q7L985 606 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 FAM122BQ7Z309 247 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 CLDN22Q8N7P3 220 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 AQP11Q8NBQ7 271 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 NOXO1Q8NFA2 376 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 OR10G2Q8NGC3 310 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 OR6N1Q8NGY5 312 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 LINC01560Q8TB33 94 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 FANK1Q8TC84 345 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 FNDC8Q8TC99 324 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 GIPC3Q8TF64 312 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 HSD17B8Q92506 261 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 MARVELD3Q96A59 401 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms