RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NOX3Q9HBY0 568 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 MOV10Q9HCE1 1003 aaKnown RBP3.2□□□□□ -1.9
YBX3-205ENST00000536107 HHATLQ9HCP6 504 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 FBXO6Q9NRD1 293 aaPredicted RBP3.2□□□□□ -1.9
YBX3-205ENST00000536107 INPP5EQ9NRR6 644 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 MAT2BQ9NZL9 334 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 MYEF2Q9P2K5 600 aaKnown RBP3.2□□□□□ -1.9
YBX3-205ENST00000536107 CTNNAL1Q9UBT7 734 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 MRTO4Q9UKD2 239 aaKnown RBP3.2□□□□□ -1.9
YBX3-205ENST00000536107 ZNF490Q9ULM2 529 aaPredicted RBP3.2□□□□□ -1.9
YBX3-205ENST00000536107 HYOU1Q9Y4L1 999 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 ATP6V1DQ9Y5K8 247 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 SMAD5-AS1Q9Y6J3 95 aa3.2□□□□□ -1.9
YBX3-205ENST00000536107 hCG_1818297A0A087WSY0 165 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZNF785A8K8V0 405 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 APOC4-APOC2K7ER74 178 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 PDLIM1O00151 329 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 SULT2B1O00204 365 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 F2RL2O00254 374 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZNF189O75820 626 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 BCAS2O75934 225 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 UTS2O95399 124 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 PAHP00439 452 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 APOC2P02655 101 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 H2AFZP0C0S5 128 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 HPGDP15428 266 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 CD1DP15813 335 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 CSNK2A2P19784 350 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 OGNP20774 298 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 PSMA4P25789 261 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 ELK4P28324 431 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 GLRXP35754 106 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ELK3P41970 407 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 GRIA1P42261 906 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ASMTP46597 345 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 VEGFCP49767 419 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 PSMD4P55036 377 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 CSNK2A1P68400 391 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 SARNPP82979 210 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 SLC18A2Q05940 514 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZNF155Q12901 538 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 LTB4RQ15722 352 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 PRICKLE4Q2TBC4 344 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 KHDC1LQ5JSQ8 128 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 PHYHD1Q5SRE7 291 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 TSPO2Q5TGU0 170 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 NPSR1Q6W5P4 371 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 CCDC121Q6ZUS5 278 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 H2AFVQ71UI9 128 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ABHD12BQ7Z5M8 362 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 SLC15A3Q8IY34 581 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZCCHC7Q8N3Z6 543 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 MAPKAPK5-AS1Q8N8E1 139 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ZNF527Q8NB42 609 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 OR1K1Q8NGR3 316 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 RNF138Q8WVD3 245 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 LHX4Q969G2 390 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 UBE2E3Q969T4 207 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 LRRC39Q96DD0 335 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 THOC1Q96FV9 657 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 PLEKHA8Q96JA3 519 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 OR5M11Q96RB7 305 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 RBBP8Q99708 897 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 NUDT16L1Q9BRJ7 211 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 EFCAB11Q9BUY7 163 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 FRMD8P1Q9BZ68 369 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 NMUR2Q9GZQ4 415 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 EGLN1Q9GZT9 426 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 COQ10BQ9H8M1 238 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 ANKRA2Q9H9E1 313 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 SAYSD1Q9NPB0 183 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 RLIMQ9NVW2 624 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 MRPL15Q9P015 296 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 SENP1Q9P0U3 644 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 CAB39Q9Y376 341 aaPredicted RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 ASB4Q9Y574 426 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 NPTNQ9Y639 398 aa3.19□□□□□ -1.9
YBX3-205ENST00000536107 DYNC1H1Q14204 4646 aaKnown RBP3.19□□□□□ -1.9
YBX3-205ENST00000536107 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 IGHV1-69DA0A0B4J2H0 117 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 CENPVL3A0A0U1RRI6 287 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 KIR2DS1A0A191URI9 304 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 TCRBV4S1A1TA0A5B7 111 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 CCDC154A6NI56 674 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 SDR42E2A6NKP2 422 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 AQP7P3A6NL99 342 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 ERI2A8K979 691 aaKnown RBP3.18□□□□□ -1.9
YBX3-205ENST00000536107 LGALS16A8MUM7 142 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 A8MXK9 166 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 ZNF587BE7ETH6 402 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
YBX3-205ENST00000536107 P2RY10O00398 339 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 PLPP1O14494 284 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 SPRY3O43610 288 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 EFNA2O43921 213 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 TMPRSS11DO60235 418 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 DEDDO75618 318 aa3.18□□□□□ -1.9
YBX3-205ENST00000536107 LHBP01229 141 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms