RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HRNRQ86YZ3 2850 aaPredicted RBP19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 TRAV27A0A087WT01 109 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 SH3PXD2BA1X283 911 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 M0R3G1 203 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 CDC42EP2O14613 210 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 GSC2O15499 205 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 ATP5HO75947 161 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 GADD45GO95257 159 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 BCL10O95999 233 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 CDH2P19022 906 aaPredicted RBP19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 RRM2P31350 389 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 OMPP47874 163 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 LIMS1P48059 325 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 SSX8Q7RTT4 187 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 OAFQ86UD1 273 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 CDK20Q8IZL9 346 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 LRRC75AQ8NAA5 344 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 OR4K5Q8NGD3 323 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 OR1K1Q8NGR3 316 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 OR52N5Q8NH56 324 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 POP5Q969H6 163 aaKnown RBP19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 PLPPR2Q96GM1 343 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 LRGUKQ96M69 825 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 ADAD1Q96M93 576 aaKnown RBP19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 TNFRSF13CQ96RJ3 184 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 CRLF2Q9HC73 371 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 NPAP1Q9NZP6 1156 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 AKAP6Q13023 2319 aa19.93■□□□□ 0.78
SFSWAP-204ENST00000535399 PDZD2O15018 2839 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 A0A1W2PR80 420 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 A0A1W2PRG6 482 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 SLC9A3P48764 834 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 NR1H2P55055 460 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 ACKR1Q16570 336 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 CEACAM16Q2WEN9 425 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 OR51A7Q8NH64 312 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 ASB10Q8WXI3 467 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 BCL2L2Q92843 193 aaPredicted RBP19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 TMEM54Q969K7 222 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 SLC25A44Q96H78 314 aaPredicted RBP19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 FAM46AQ96IP4 442 aaKnown RBP19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 TRIM15Q9C019 465 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 NELFAQ9H3P2 528 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 NGBQ9NPG2 151 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 CSMD2Q7Z408 3487 aa19.92■□□□□ 0.78
SFSWAP-204ENST00000535399 NPIPB13A6NJU9 1138 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 AQP12BA6NM10 295 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 NPIPB4C9JG80 1138 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 STAMBPO95630 424 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 ZNF26P17031 533 aaPredicted RBP19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 CSNK1A1P48729 337 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 RASSF2P50749 326 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 SH3BGRP55822 239 aaPredicted RBP19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 ARF1P84077 181 aaKnown RBP19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 CHRNB3Q05901 458 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 RUNX1T1Q06455 604 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 TBRG1Q3YBR2 411 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 ANKDD1AQ495B1 522 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 FAM98BQ52LJ0 330 aaKnown RBP19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 HIKESHIQ53FT3 197 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 ALG10Q5BKT4 473 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 NCMAPQ5T1S8 102 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 AQP12AQ8IXF9 295 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 ADGRG5Q8IZF4 528 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 OR6N1Q8NGY5 312 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 TMEM204Q9BSN7 226 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 LIME1Q9H400 295 aa19.91■□□□□ 0.78
SFSWAP-204ENST00000535399 DPRXA6NFQ7 191 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 PGA4P0DJD7 388 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 PGA3P0DJD8 388 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 DAP3P51398 398 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 HMGA2P52926 109 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 ARMC4Q5T2S8 1044 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 C1QTNF12Q5T7M4 302 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 ANKRD16Q6P6B7 361 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 CDH24Q86UP0 819 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 MAGEE2Q8TD90 523 aaPredicted RBP19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 ZNF566Q969W8 418 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 ALPK1Q96QP1 1244 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 GPA33Q99795 319 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 ULBP2Q9BZM5 246 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 TXNIPQ9H3M7 391 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 B3GAT2Q9NPZ5 323 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 GLTPQ9NZD2 209 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 POMPQ9Y244 141 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 AMDHD2Q9Y303 409 aa19.9■□□□□ 0.78
SFSWAP-204ENST00000535399 MCIDASD6RGH6 385 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 PTP4A3O75365 173 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 KRT36O76013 467 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 PLAUP00749 431 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 CTXN1P60606 82 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 ZBED5Q49AG3 693 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 ZER1Q7Z7L7 766 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 IGFN1Q86VF2 1251 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 MRPL13Q9BYD1 178 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 KRCC1Q9NPI7 259 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 SLC7A8Q9UHI5 535 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 LYVE1Q9Y5Y7 322 aa19.89■□□□□ 0.77
SFSWAP-204ENST00000535399 A0A096LPE4 126 aa19.88■□□□□ 0.77
SFSWAP-204ENST00000535399 A0A1W2PPZ6 126 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms