RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 LRRN3E7EW58 273 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 RPL36A-HNRNPH2H7BZ11 118 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 SSX4O60224 188 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 SHOX2O60902 331 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 SEC14L2O76054 403 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 HPRP00739 348 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 IGHG1P01857 330 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 THRBP10828 461 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 HLA-DOBP13765 273 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 TNFRSF1BP20333 461 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 KDELR2P33947 212 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 OR1E2P47887 323 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 DAP3P51398 398 aaKnown RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF84P51523 738 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 DSCR9P59020 149 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 MXRA7P84157 204 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ST3GAL3Q11203 375 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 CARTPTQ16568 116 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 SEZ6L2Q6UXD5 910 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 C20orf196Q8IYI0 205 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 IL17RDQ8NFM7 739 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 TMEM239Q8WW34 195 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 GEMIN6Q8WXD5 167 aaKnown RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 LRR1Q96L50 414 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF583Q96ND8 569 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 WFDC6Q9BQY6 131 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 KATNB1Q9BVA0 655 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 PCDHAC1Q9H158 963 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 KCNN2Q9H2S1 579 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 RNF121Q9H920 327 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 DLL4Q9NR61 685 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ADA2Q9NZK5 511 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 RPS6KA6Q9UK32 745 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 FBXO9Q9UK97 447 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 FBXL3Q9UKT7 428 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 FAM32AQ9Y421 112 aaKnown RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 GMNCA6NCL1 334 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 RNF223E7ERA6 249 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 CXCR6O00574 342 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 OR7A10O76100 309 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF432O94892 652 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 UBL3O95164 117 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 MT-ND1P03886 318 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 HEXAP06865 529 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 CSF3P09919 207 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SAGP10523 405 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 B4GALT1P15291 398 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 CBR1P16152 277 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 FUT1P19526 365 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 ACVR1BP36896 505 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SERPINF1P36955 418 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 PTDSS1P48651 473 aaKnown RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 GZMMP51124 257 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SELENOWP63302 87 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SLC25A3Q00325 362 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 LTBQ06643 244 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 TNK1Q13470 666 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 PIN1Q13526 163 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 MELKQ14680 651 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 KRT72Q14CN4 511 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 GSG1Q2KHT4 349 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 C3orf36Q3SXR2 165 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 IFI44LQ53G44 452 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM53Q6P2H8 277 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF730Q6ZMV8 503 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 MDP1Q86V88 176 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM123Q8N131 208 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 OR6X1Q8NH79 312 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM255BQ8WV15 326 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SLC25A44Q96H78 314 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 TXNDC15Q96J42 360 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 PRRC1Q96M27 445 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 FOXB1Q99853 325 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SMR3AQ99954 134 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 VRK1Q99986 396 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 LRMDAQ9H2I8 198 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 DYNLRB1Q9NP97 96 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 SPAG4Q9NPE6 437 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 KRCC1Q9NPI7 259 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-232ENST00000489053 INIPQ9NRY2 104 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 CMTM6Q9NX76 183 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 GLTPQ9NZD2 209 aa7.96□□□□□ -1.14
HDAC6-232ENST00000489053 HIVEP2P31629 2446 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 FREM1Q5H8C1 2179 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 NAV3Q8IVL0 2385 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 HTR3EA5X5Y0 456 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 B9A039 149 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 OVOL3O00110 214 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 FZD7O75084 574 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 SERPINA1P01009 418 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 IGHV4-39P01824 125 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 HLA-HP01893 362 aa7.95□□□□□ -1.14
HDAC6-232ENST00000489053 OR4A8P0C604 315 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms