RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PNLDC1Q8NA58 520 aaKnown RBP12.65□□□□□ -0.38
HDAC1-206ENST00000476391 OR1J2Q8NGS2 313 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 CA5BP1Q8WTZ4 195 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 LYSMD1Q96S90 227 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 ADAM2Q99965 735 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 LMAN2LQ9H0V9 348 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 AHSPQ9NZD4 102 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 FCF1Q9Y324 198 aaKnown RBP12.65□□□□□ -0.38
HDAC1-206ENST00000476391 TRBV6-7A0A0A0MS04 114 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 F10P00742 488 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 HCKP08631 526 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 TMIGD3P0DMS9 266 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 MAOAP21397 527 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 EDNRAP25101 427 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ADH6P28332 368 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 TEAD1P28347 426 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 GRK4P32298 578 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 GJA5P36382 358 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 SLC6A9P48067 706 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 HSD11B2P80365 405 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 NHLH2Q02577 135 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 LTBQ06643 244 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 CLINT1Q14677 625 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 SURF2Q15527 256 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 CLEC9AQ6UXN8 241 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM255BQ8WV15 326 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 FOXRED1Q96CU9 486 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 CD180Q99467 661 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 FN3KRPQ9HA64 309 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 WASF3Q9UPY6 502 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 FAM221BA6H8Z2 402 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 SOCS5O75159 536 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 RPN2P04844 631 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 NME2P22392 152 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 TAS2R19P59542 299 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ACTBP60709 375 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 LSM6P62312 80 aaKnown RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ACTG1P63261 375 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 RHEBQ15382 184 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 CCSMST1Q4G0I0 132 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 PAPD4Q6PIY7 484 aaKnown RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 SZRD1Q7Z422 152 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 CCDC54Q8NEL0 328 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 OR6J1Q8NGC5 347 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 OR10D4PQ8NGN7 298 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 KLK6Q92876 244 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 SLC41A3Q96GZ6 507 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-206ENST00000476391 IP6K3Q96PC2 410 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 RBPJLQ9UBG7 517 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ADAM18Q9Y3Q7 739 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 DYRK1BQ9Y463 629 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
HDAC1-206ENST00000476391 A0A0B4J2A0 478 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 C9JQL5 133 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 CCSO14618 274 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 ADAM10O14672 748 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 FRS3O43559 492 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 HLA-AP01891 365 aaKnown RBP12.63□□□□□ -0.39
HDAC1-206ENST00000476391 OR2T7P0C7T2 308 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 FXYD6P3P58550 94 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
HDAC1-206ENST00000476391 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
HDAC1-206ENST00000476391 FUT5Q11128 374 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 ADGRF1Q5T601 910 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 NKAIN2Q5VXU1 208 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 ANKRD16Q6P6B7 361 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
HDAC1-206ENST00000476391 OR2T27Q8NH04 317 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 TM4SF18Q96CE8 201 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 SLC17A9Q9BYT1 436 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 CWH43Q9H720 699 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 SHPKQ9UHJ6 478 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 KCNE5Q9UJ90 142 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 GPR55Q9Y2T6 319 aaPredicted RBP12.63□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF281Q9Y2X9 895 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 TVP23AA6NH52 213 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 RIIAD1A6NNX1 92 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 MBP02144 154 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 NPPBP16860 134 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 VAMP1P23763 118 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 PSMB6P28072 239 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 RAB1AP62820 205 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 PPA1Q15181 289 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 STAC2Q6ZMT1 411 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 ETFBKMTQ8IXQ9 262 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 GABRG1Q8N1C3 465 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms