RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 AHCYL1O43865 530 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TRMUO75648 421 aaKnown RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 SYNGR4O95473 234 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 BCL10O95999 233 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 IGHMP01871 453 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 EDN3P14138 238 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GABRA1P14867 456 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ACADSP16219 412 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ZNF43P17038 809 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 VAMP1P23763 118 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 EDNRAP25101 427 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SDHAP31040 664 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CEACAM8P31997 349 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 KIR2DL2P43627 348 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 HSPA13P48723 471 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 PCYT1AP49585 367 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CLDN17P56750 224 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 NFATC3Q12968 1075 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 MAD2L1BPQ15013 274 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 GUSBP1Q15486 140 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TAF11Q15544 211 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ETFDHQ16134 617 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SNAPC1Q16533 368 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 PGGHGQ32M88 737 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SOWAHCQ53LP3 525 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 MESTQ5EB52 335 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 PHYHD1Q5SRE7 291 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 C6orf141Q5SZD1 244 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GPR139Q6DWJ6 353 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GTF2IRD2BQ6EKJ0 949 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ZNF585AQ6P3V2 769 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GFRALQ6UXV0 394 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 RPTNQ6XPR3 784 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CHMP1BQ7LBR1 199 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 NUFIP2Q7Z417 695 aaKnown RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 NANOGNBQ7Z5D8 188 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 THAP5Q7Z6K1 395 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GTF2IRD2Q86UP8 949 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CPOQ8IVL8 374 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TUSC5Q8IXB3 177 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 OR6V1Q8N148 313 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 RPRMLQ8N4K4 120 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 MARVELD2Q8N4S9 558 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SLC37A3Q8NCC5 494 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ZNF555Q8NEP9 628 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 OR8J1Q8NGP2 316 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 OR4K13Q8NH42 304 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 OR6X1Q8NH79 312 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TEX47Q8TBZ9 253 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TMEM163Q8TC26 289 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 RNF128Q8TEB7 428 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ABHD3Q8WU67 409 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 APH1BQ8WW43 257 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ASB10Q8WXI3 467 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 HDAC2Q92769 488 aaKnown RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 TMEM54Q969K7 222 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 RASD2Q96D21 266 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SLC25A44Q96H78 314 aaPredicted RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 LRR1Q96L50 414 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TSPAN32Q96QS1 320 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 IL4I1Q96RQ9 567 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 NMNAT3Q96T66 252 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 TEAD3Q99594 435 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 HCAR1Q9BXC0 346 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 VCXQ9H320 206 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 BCO1Q9HAY6 547 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GP6Q9HCN6 339 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SRA1Q9HD15 236 aaKnown RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 CMC2Q9NRP2 79 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 PLSCR4Q9NRQ2 329 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 MRPS18AQ9NVS2 196 aaKnown RBP5.28□□□□□ -1.56
USP39-213ENST00000467885 MED29Q9NX70 200 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 KIF17Q9P2E2 1029 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 CLCF1Q9UBD9 225 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 GRHPRQ9UBQ7 328 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ENOPH1Q9UHY7 261 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ZNF175Q9Y473 711 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 FAM215AQ9Y5M1 114 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 FLVCR1Q9Y5Y0 555 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 MED12Q93074 2177 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 NCKAP5O14513 1909 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TPRP12270 2363 aaKnown RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 IGKV1D-43A0A0B4J1Z2 117 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 TEX13CA0A0J9YWL9 993 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 A0A1W2PRG6 482 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PRSS37A4D1T9 235 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MBD3L4A6NDZ8 208 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 MBD3L3A6NE82 208 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 TRIM64A6NGJ6 449 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 MBD3L5A6NJ08 208 aaPredicted RBP5.27□□□□□ -1.57
USP39-213ENST00000467885 SLC22A20A6NK97 555 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 FAM183AA6NL82 134 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ZNF726A6NNF4 738 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 M0R129 80 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ARHGEF9O43307 516 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 SLC19A2O60779 497 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 WDR1O75083 606 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 ENTPD6O75354 484 aa5.27□□□□□ -1.57
USP39-213ENST00000467885 PLGP00747 810 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms