RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR1J2Q8NGS2 313 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 OR6N1Q8NGY5 312 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 IPCEF1Q8WWN9 437 aaPredicted RBP5.6□□□□□ -1.51
USP54-202ENST00000413442 ZNF566Q969W8 418 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 MCUR1Q96AQ8 359 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 BPIFA2Q96DR5 249 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SGTBQ96EQ0 304 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 NSL1Q96IY1 281 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 TPD52L3Q96J77 140 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 CCT8L2Q96SF2 557 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SEPHS2Q99611 448 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 LRMDAQ9H2I8 198 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 KCNN2Q9H2S1 579 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 UBTD1Q9HAC8 227 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 CRLF2Q9HC73 371 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 MYOZ1Q9NP98 299 aaPredicted RBP5.6□□□□□ -1.51
USP54-202ENST00000413442 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 CBLN4Q9NTU7 201 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 GLTPQ9NZD2 209 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ARMCX1Q9P291 453 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 POFUT2Q9Y2G5 429 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 PLEKHA6Q9Y2H5 1048 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 HIF3AQ9Y2N7 669 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ENPP4Q9Y6X5 453 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 NOTCH2Q04721 2471 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ABCA4P78363 2273 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 FBN2P35556 2912 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SH3PXD2BA1X283 911 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 SHISA9B4DS77 424 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 B9A039 149 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 BLOC1S5-TXNDC5H3BN57 136 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 H7C417 338 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 NME4O00746 187 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ABCD4O14678 606 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 RNF13O43567 381 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 UPK3AO75631 287 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 STAMBPO95630 424 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 OPN1SWP03999 348 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ERCC1P07992 297 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 CSF3P09919 207 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 OR8G3PP0DMU2 310 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ACADSP16219 412 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 CALB2P22676 271 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 CSNK1A1P48729 337 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 RASSF2P50749 326 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 HMGA2P52926 109 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 RIPPLY3P57055 190 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ARF1P84077 181 aaKnown RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 IL1RL1Q01638 556 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 PIN1Q13526 163 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 CEACAM16Q2WEN9 425 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 SLC36A2Q495M3 483 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 LRRC23Q53EV4 343 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 FAM209AQ5JX71 171 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 GPR139Q6DWJ6 353 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 DEF8Q6ZN54 512 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 MBOAT2Q6ZWT7 520 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 OAFQ86UD1 273 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 COMTD1Q86VU5 262 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 TREML1Q86YW5 311 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 CCDC197Q8NCU1 140 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ZNF540Q8NDQ6 660 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 OR52N5Q8NH56 324 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 LILRB1Q8NHL6 650 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 VANGL1Q8TAA9 524 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 TMEM54Q969K7 222 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 FAM162AQ96A26 154 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 PYURFQ96I23 114 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 MOGAT1Q96PD6 335 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 SLC38A2Q96QD8 506 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 FOXB1Q99853 325 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ALG12Q9BV10 488 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 PRR14Q9BWN1 585 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 MRPL13Q9BYD1 178 aaKnown RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 ULBP2Q9BZM5 246 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 TXNIPQ9H3M7 391 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 LIME1Q9H400 295 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ZNF442Q9H7R0 627 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 MEPEQ9NQ76 525 aaPredicted RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 B3GNT2Q9NY97 397 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 ADA2Q9NZK5 511 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 CD300AQ9UGN4 299 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 GPR160Q9UJ42 338 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 POU2F3Q9UKI9 436 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 PRPF19Q9UMS4 504 aaKnown RBP5.59□□□□□ -1.51
USP54-202ENST00000413442 A4GNTQ9UNA3 340 aa5.59□□□□□ -1.51
USP54-202ENST00000413442 MED13LQ71F56 2210 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ABCA12Q86UK0 2595 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 NBPF19A0A087WUL8 3843 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 A0A1W2PPR1 153 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 M0R1B8 84 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 NDUFS8O00217 210 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 IMPA2O14732 288 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 CLOCKO15516 846 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 DHHO43323 396 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 IDH3BO43837 385 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 SHOX2O60902 331 aaPredicted RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 ZNF682O95780 498 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms