RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 FOXO1Q12778 655 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 SELENBP1Q13228 472 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 OXA1LQ15070 435 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.95□□□□□ -0.661e-8■■■■■ 26.9
SPTBN1-203ENST00000389980 AGAP7PQ5VUJ5 663 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 H1FNTQ75WM6 255 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 NXPE2Q96DL1 559 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 AGAP4Q96P64 663 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 MGLLQ99685 303 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 MND1Q9BWT6 205 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 RERGLQ9H628 205 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 CHST11Q9NPF2 352 aa10.95□□□□□ -0.66
SPTBN1-203ENST00000389980 C12orf71A8MTZ7 269 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 H0YC42 278 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 J3QRE1 110 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 M0R3G1 203 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TPD52L2O43399 206 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 APEHP13798 732 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SPI1P17947 270 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ACVR1BP36896 505 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 MAP2K6P52564 334 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 RRADP55042 308 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 RUNX1T1Q06455 604 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TRIM16LQ309B1 348 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF367Q7RTV3 350 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SULF2Q8IWU5 870 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 FAM83FQ8NEG4 500 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OR2M7Q8NG81 312 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OR6K6Q8NGW6 343 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OR6S1Q8NH40 331 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OR14L1PQ8NHC6 308 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 GATAD2BQ8WXI9 593 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 THAP4Q8WY91 577 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF649Q9BS31 505 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 NMNAT2Q9BZQ4 307 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ADGRL4Q9HBW9 690 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 MOV10Q9HCE1 1003 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SRA1Q9HD15 236 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ALKBH4Q9NXW9 302 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 CORINQ9Y5Q5 1042 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SPIN1Q9Y657 262 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 IRGMA1A4Y4 181 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 RAMP1O60894 148 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 CLPXO76031 633 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 IGHA1P01876 353 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 GADD45AP24522 165 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 GDF1P27539 372 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SRD5A2P31213 254 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 NAA10P41227 235 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 DIO1P49895 249 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 B3GALT5-AS1P59052 145 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SPHARQ15513 63 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TSTQ16762 297 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SOWAHCQ53LP3 525 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 WIPI1Q5MNZ9 446 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 PM20D2Q8IYS1 436 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 PROKR2Q8NFJ6 384 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TXNDC15Q96J42 360 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 OPALINQ96PE5 141 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TTTY10Q9BZA0 68 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 SYT4Q9H2B2 425 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 TXNIPQ9H3M7 391 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 RNF167Q9H6Y7 350 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF552Q9H707 407 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ZFP64Q9NPA5 681 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ERVK13-1Q9NX77 482 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 EXOSC1Q9Y3B2 195 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 CSAG2Q9Y5P2 127 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ATMQ13315 3056 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-203ENST00000389980 PNMA8CA0A1B0GUJ8 204 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 SULT2B1O00204 365 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 EFSO43281 561 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 GPANK1O95872 356 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 SBK2P0C263 348 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 IFNGR1P15260 489 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 ARPC4P59998 168 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 POU3F1Q03052 451 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 MFSD13AQ14CX5 517 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 DEFB109BQ30KR1 87 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 RNLSQ5VYX0 342 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 OTPQ5XKR4 325 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 GPR139Q6DWJ6 353 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 GALNTL5Q7Z4T8 443 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 OR6V1Q8N148 313 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 RFLNBQ8N5W9 214 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 EXD3Q8N9H8 876 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 ZNF519Q8TB69 540 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 SLC25A43Q8WUT9 341 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 FOXN4Q96NZ1 517 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 FAM173AQ9BQD7 235 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 MED29Q9NX70 200 aa10.93□□□□□ -0.66
SPTBN1-203ENST00000389980 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms