RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TMEM81Q6P7N7 255 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 FAM111BQ6SJ93 734 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 NUP54Q7Z3B4 507 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 FGD2Q7Z6J4 655 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 LIX1LQ8IVB5 337 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR2T33Q8NG76 320 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR52R1Q8NGF1 315 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR52L1Q8NGH7 329 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR6T1Q8NGN1 323 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR5M3Q8NGP4 307 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR52P1PQ8NH57 321 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ENKURQ8TC29 256 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CA5BP1Q8WTZ4 195 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 RND1Q92730 232 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CNRIP1Q96F85 164 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 JSRP1Q96MG2 331 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 OR7D2Q96RA2 312 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 GON7Q9BXV9 100 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 METTL7AQ9H8H3 244 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 RNF121Q9H920 327 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ERVK13-1Q9NX77 482 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ING3Q9NXR8 418 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 SF3B6Q9Y3B4 125 aaKnown RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CCDC168Q8NDH2 2452 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 AKAP9Q99996 3911 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 POLQO75417 2590 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ADGRG4Q8IZF6 3080 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 A0A087WV62 115 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ARPC4-TTLL3A0A0A6YYG9 625 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ANKRD61A6NGH8 418 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 FRG2CA6NGY1 282 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 C19orf84I3L1E1 186 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ORC5O43913 435 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 STX11O75558 287 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SOX14O95416 240 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 IGHA1P01876 353 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 S1PR1P21453 382 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 GDF1P27539 372 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CHRNB4P30926 498 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MTNR1BP49286 362 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ETV1P50549 477 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 RGS8P57771 180 aaPredicted RBP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 FBXW4P57775 412 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 BTG1P62324 171 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MGAT2Q10469 447 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 HNRNPA0Q13151 305 aaKnown RBP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 DUSP8Q13202 625 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SNTA1Q13424 505 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 EXOSC7Q15024 291 aaKnown RBP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SF3B4Q15427 424 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 GXYLT1Q4G148 440 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SLC30A6Q6NXT4 461 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 PLEKHM3Q6ZWE6 761 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SZRD1Q7Z422 152 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 PLCZ1Q86YW0 608 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SNX29P2Q8IUI4 249 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CCDC116Q8IYX3 515 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF295-AS1Q8N0V1 137 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MMP21Q8N119 569 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CLIP4Q8N3C7 705 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MS4A15Q8N5U1 240 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 HAVCR2Q8TDQ0 301 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 PHYHIPQ92561 330 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SLC9A6Q92581 669 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 OMA1Q96E52 524 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MS4A4EQ96PG1 132 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 SDHCQ99643 169 aaPredicted RBP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 MCHR1Q99705 422 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ANGPTL4Q9BY76 406 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 NXF5Q9H1B4 397 aaKnown RBP9.37□□□□□ -0.91
COL5A1-202ENST00000371820 ABCB9Q9NP78 766 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 TNFRSF10DQ9UBN6 386 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CLEC2DQ9UHP7 191 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CBLCQ9ULV8 474 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 CDH10Q9Y6N8 788 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 V9GYH0 126 aa9.37□□□□□ -0.91
COL5A1-202ENST00000371820 TRAPPC13A5PLN9 417 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 ADAM10O14672 748 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 TO15178 435 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SURF4O15260 269 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PLOD3O60568 738 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC43A1O75387 559 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 CBX7O95931 251 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 CHRM4P08173 479 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC2A2P11168 524 aaPredicted RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PEPDP12955 493 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 MYL9P24844 172 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 IL12BP29460 328 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC1A3P43003 542 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms