RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SIGLEC16A6NMB1 481 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 PDLIM1O00151 329 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 PALMO75781 387 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 IGHG3P01860 377 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 HSD17B1P14061 328 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TNNI3P19429 210 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TEAD1P28347 426 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 PPP1R2P41236 205 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 BCL2L1Q07817 233 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 GLIPR1L2Q4G1C9 344 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 ACER2Q5QJU3 275 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 BEND6Q5SZJ8 279 aaPredicted RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 LINC00242Q5T6M2 205 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 FHL5Q5TD97 284 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 SEL1L2Q5TEA6 688 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 REP15Q6BDI9 236 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 SULT1C3Q6IMI6 304 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 SCYL2Q6P3W7 929 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 CERS6Q6ZMG9 384 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 NET1Q7Z628 596 aaPredicted RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TSEN54Q7Z6J9 526 aaKnown RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 CCDC36Q8IYA8 594 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR4Q3Q8NH05 313 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 PIH1D2Q8WWB5 315 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 NUS1Q96E22 293 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 C19orf60Q96EN9 201 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 DTNBP1Q96EV8 351 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 PSKH2Q96QS6 385 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR2M4Q96R27 311 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 MCCC1Q96RQ3 725 aaPredicted RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 RANBP9Q96S59 729 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 FAM173AQ9BQD7 235 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 MRPL13Q9BYD1 178 aaKnown RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TRIM15Q9C019 465 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 HEXA-AS1Q9H8Q6 139 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 ESM1Q9NQ30 184 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 GHRLQ9UBU3 117 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 CD84Q9UIB8 345 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 CHMP2BQ9UQN3 213 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 MOB4Q9Y3A3 225 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 ADGRG4Q8IZF6 3080 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 ITPR3Q14573 2671 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CSMD2Q7Z408 3487 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 TACC2O95359 2948 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 FOXI3A8MTJ6 420 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 NPIPA2E9PIF3 369 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 E9PQ18 207 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MKRN2OSH3BPM6 223 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 POLR1CO15160 346 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 KIAA0754O94854 1291 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR4F21O95013 312 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 GSTT2P0CG29 244 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 GSTT2BP0CG30 244 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CALRP27797 417 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 DLSTP36957 453 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MFAP2P55001 183 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MAXP61244 160 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 PPP1CAP62136 330 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 UBE2IP63279 158 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 FCN2Q15485 313 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 TRIP10Q15642 601 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CAMK4Q16566 473 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 TMEM44Q2T9K0 475 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 FAM219BQ5XKK7 198 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 FAM199XQ6PEV8 388 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 PAQR6Q6TCH4 344 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ABRAXAS1Q6UWZ7 409 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 LHFPL4Q7Z7J7 247 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 PHF13Q86YI8 300 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF440Q8IYI8 595 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CENPLQ8N0S6 344 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CCDC112Q8NEF3 446 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR10G6Q8NH81 332 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 FLVCR1-AS1Q8TAF5 88 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CT55Q8WUE5 264 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 KIAA1143Q96AT1 154 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ELMO2Q96JJ3 720 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 C9orf72Q96LT7 481 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 VSTM2LQ96N03 204 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MCEEQ96PE7 176 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 VPS35Q96QK1 796 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 GPA33Q99795 319 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 RBM4BQ9BQ04 359 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 TTYH2Q9BSA4 534 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 TUBGCP2Q9BSJ2 902 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 RIOK2Q9BVS4 552 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ULBP3Q9BZM4 244 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 GFRA4Q9GZZ7 299 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 SAMSN1Q9NSI8 373 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CENPMQ9NSP4 180 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 DCAF13Q9NV06 445 aaKnown RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 KLRF1Q9NZS2 232 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ADAM22Q9P0K1 906 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 RCOR3Q9P2K3 495 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 SLC23A2Q9UGH3 650 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MLXQ9UH92 298 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms