RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HCN3Q9P1Z3 774 aa7.92□□□□□ -1.14
CLK1-201ENST00000321356 MTFP1Q9UDX5 166 aa7.92□□□□□ -1.14
CLK1-201ENST00000321356 ING1Q9UK53 422 aaPredicted RBP7.92□□□□□ -1.14
CLK1-201ENST00000321356 PPIEQ9UNP9 301 aaKnown RBP7.92□□□□□ -1.14
CLK1-201ENST00000321356 MRPS33Q9Y291 106 aaKnown RBP7.92□□□□□ -1.14
CLK1-201ENST00000321356 OR10H1Q9Y4A9 318 aa7.92□□□□□ -1.14
CLK1-201ENST00000321356 SPEF1Q9Y4P9 236 aa7.92□□□□□ -1.14
CLK1-201ENST00000321356 DNAH14Q0VDD8 3507 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 TMEM131Q92545 1883 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 TRAV8-7A0A075B6U6 113 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 HSPB2A8KAH6 182 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 MCRIP1C9JLW8 97 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 BLOC1S5-TXNDC5H3BN57 136 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 XRCC3O43542 346 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 RPP14O95059 124 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 TNFP01375 233 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 TMIGD3P0DMS9 266 aaPredicted RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 CTHP32929 405 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 TPMTP51580 245 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 PGDP52209 483 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 CTXN1P60606 82 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 PSMA6P60900 246 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 EGR4Q05215 589 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 LTBQ06643 244 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 SKP2Q13309 424 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 HTR4Q13639 388 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 HSPB2Q16082 182 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ALG10Q5BKT4 473 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 EMC4Q5J8M3 183 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 NUP54Q7Z3B4 507 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 MCATQ8IVS2 390 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 C19orf47Q8N9M1 422 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 SPERTQ8NA61 448 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 OR13H1Q8NG92 308 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 OR2G2Q8NGZ5 317 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ZNF417Q8TAU3 575 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ADAMTS18Q8TE60 1221 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 RBPMSQ93062 196 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 MCHR2Q969V1 340 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ELMOD3Q96FG2 381 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ADAD1Q96M93 576 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 SFXN2Q96NB2 322 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 DGAT2Q96PD7 388 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 CDCA3Q99618 268 aaPredicted RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 LPAR4Q99677 370 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 CHIAQ9BZP6 476 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 OR10A5Q9H207 317 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 MTIF3Q9H2K0 278 aaKnown RBP7.91□□□□□ -1.14
CLK1-201ENST00000321356 CERS4Q9HA82 394 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 PRTFDC1Q9NRG1 225 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 MED9Q9NWA0 146 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ZNF69Q9UC07 566 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 ERVK-19Q9WJR5 959 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 HS3ST3A1Q9Y663 406 aa7.91□□□□□ -1.14
CLK1-201ENST00000321356 SPTBP11277 2137 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TMEM212A6NML5 194 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 HMSDA8MTL9 139 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 PYCARD-AS1I3L0S3 204 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 SERPINI2O75830 405 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 SCO1O75880 301 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 HRGP04196 525 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 VSIG10L2P0DP72 767 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 ALOX5APP20292 161 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 NFYAP23511 347 aaPredicted RBP7.9□□□□□ -1.14
CLK1-201ENST00000321356 ITPKBP27987 946 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 SOX2P48431 317 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 DLX5P56178 289 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 SKP1P63208 163 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 BTG2P78543 158 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 EGR3Q06889 387 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 PLA2G7Q13093 441 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 BAMBIQ13145 260 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 CD226Q15762 336 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 MESTQ5EB52 335 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TMEM31Q5JXX7 168 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 COL13A1Q5TAT6 717 aaPredicted RBP7.9□□□□□ -1.14
CLK1-201ENST00000321356 EEF1A1P5Q5VTE0 462 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 OR5M10Q6IEU7 315 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 ANKRD16Q6P6B7 361 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 FBXO46Q6PJ61 603 aaPredicted RBP7.9□□□□□ -1.14
CLK1-201ENST00000321356 FAM198BQ6UWH4 519 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TMEM184AQ6ZMB5 413 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 C3P1Q6ZMU1 363 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 KANSL1Q7Z3B3 1105 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TMPRSS12Q86WS5 348 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 ZNF761Q86XN6 746 aaPredicted RBP7.9□□□□□ -1.14
CLK1-201ENST00000321356 GLB1L2Q8IW92 636 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 AVL9Q8NBF6 648 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 GPR148Q8TDV2 347 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 HMGB4Q8WW32 186 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TOE1Q96GM8 510 aaKnown RBP7.9□□□□□ -1.14
CLK1-201ENST00000321356 CCDC120Q96HB5 630 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 TSPAN32Q96QS1 320 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 LMF1Q96S06 567 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 REG4Q9BYZ8 158 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 IGFLR1Q9H665 355 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 WDR76Q9H967 626 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms