RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SRPX2O60687 465 aaPredicted RBP11.21□□□□□ -0.61
PCF11-201ENST00000298281 ZFAND5O76080 213 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 ZNF300Q96RE9 604 aaPredicted RBP11.21□□□□□ -0.61
PCF11-201ENST00000298281 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 GAPDHSO14556 408 aaPredicted RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 EBPQ15125 230 aaKnown RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 CMPK2Q5EBM0 449 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 DHRS7BQ6IAN0 325 aaPredicted RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 FADS6Q8N9I5 356 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 ZNF597Q96LX8 424 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 RAB6CQ9H0N0 254 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 GAREM1Q9H706 876 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 M0QZQ0 153 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 GALR3O60755 368 aaPredicted RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 PIAS2O75928 621 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 RNF224P0DH78 156 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 ARSDP51689 593 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 SLC10A2Q12908 348 aaPredicted RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 OPN5Q6U736 354 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 Q6ZSR6 202 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 ZNF716A6NP11 495 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 DOC2BQ14184 412 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 C12orf76Q8N812 135 aaPredicted RBP11.21□□□□□ -0.62
PCF11-201ENST00000298281 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 BARHL1Q9BZE3 327 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 LANCL2Q9NS86 450 aa11.21□□□□□ -0.62
PCF11-201ENST00000298281 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ABHD16AO95870 558 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ATXN1LP0C7T5 689 aaKnown RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 IMPA1P29218 277 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CXADRP78310 365 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 TNK1Q13470 666 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 DPPA2Q7Z7J5 298 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 PCYT2Q99447 389 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 DPH1Q9BZG8 443 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CTDSP1Q9GZU7 261 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 RAB40ALP0C0E4 278 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 ACTBL2Q562R1 376 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SLC39A5Q6ZMH5 540 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 DOK3Q7L591 496 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 LRRTM1Q86UE6 522 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SLC35F3Q8IY50 421 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SDR9C7Q8NEX9 313 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 RAB40AQ8WXH6 277 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 BADQ92934 168 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ANKRD60Q9BZ19 345 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ANKRD19PQ9H560 264 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CNTD2Q9H8S5 307 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 EXO1Q9UQ84 846 aaKnown RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SLC16A6O15403 523 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CD70P32970 193 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 WBP2NLQ6ICG8 309 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 DPPA4Q7L190 304 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 GPR32P1Q8NGA4 272 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 APIPQ96GX9 242 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ADAM29Q9UKF5 820 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ZNF443Q9Y2A4 671 aaPredicted RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 CXCR4P61073 352 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 PIGFQ07326 219 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 TP53I3Q53FA7 332 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 PRR27Q6MZM9 219 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 BTLAQ7Z6A9 289 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 GPR119Q8TDV5 335 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 PHF1O43189 567 aaPredicted RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 POU4F3Q15319 338 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 C15orf39Q6ZRI6 1047 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 VASH2Q86V25 355 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 OR5AS1Q8N127 324 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 NAGSQ8N159 534 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 MOB3AQ96BX8 217 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 UBQLN4Q9NRR5 601 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CACNG2Q9Y698 323 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ADAM10O14672 748 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 IL4RP24394 825 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 DLX5P56178 289 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 PCK2Q16822 640 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 THEM4Q5T1C6 240 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SYT6Q5T7P8 510 aaPredicted RBP11.2□□□□□ -0.62
PCF11-201ENST00000298281 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 CDH26Q8IXH8 852 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 ACOT4Q8N9L9 421 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 OR5K2Q8NHB8 316 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 NKX2-4Q9H2Z4 354 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 C1orf198Q9H425 327 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 IL17CQ9P0M4 197 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms