RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 ZNF417Q8TAU3 575 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
APOA1-201ENST00000236850 SLC19A3Q9BZV2 496 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 SEMA6AQ9H2E6 1030 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 NMNAT1Q9HAN9 279 aaPredicted RBP13.56□□□□□ -0.24
APOA1-201ENST00000236850 MGAT4BQ9UQ53 548 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 AMDHD2Q9Y303 409 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 U3KQV3 271 aa13.56□□□□□ -0.24
APOA1-201ENST00000236850 RAI1Q7Z5J4 1906 aaPredicted RBP13.55□□□□□ -0.24
APOA1-201ENST00000236850 IGKV1D-42A0A075B6H8 117 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 TNFRSF11BO00300 401 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 CLOCKO15516 846 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 SLC43A1O75387 559 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 DEAF1O75398 565 aaPredicted RBP13.55□□□□□ -0.24
APOA1-201ENST00000236850 WNT11O96014 354 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 ITGA5P08648 1049 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 FCGR1AP12314 374 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 PTAFRP25105 342 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 SH3BGRP55822 239 aaPredicted RBP13.55□□□□□ -0.24
APOA1-201ENST00000236850 TRAM2Q15035 370 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 ATP6AP1Q15904 470 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 GABRA6Q16445 453 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 NIPAL3Q6P499 406 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 TMEM108Q6UXF1 575 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 LINC00114Q6XXX2 140 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 WDR88Q6ZMY6 472 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 TGIF2LYQ8IUE0 185 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 EPHX4Q8IUS5 362 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 UEVLDQ8IX04 471 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 ANKK1Q8NFD2 765 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 TMEM171Q8WVE6 324 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 PRSS27Q9BQR3 290 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 REEP1Q9H902 201 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 MOV10Q9HCE1 1003 aaKnown RBP13.55□□□□□ -0.24
APOA1-201ENST00000236850 OBP2BQ9NPH6 170 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 MRPL39Q9NYK5 338 aaKnown RBP13.55□□□□□ -0.24
APOA1-201ENST00000236850 DNAJB9Q9UBS3 223 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
APOA1-201ENST00000236850 TRBV4-1A0A0J9YWV2 114 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 OR6A2O95222 327 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 BGLAPP02818 100 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 THRBP10828 461 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 ANPEPP15144 967 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 CLDN17P56750 224 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 SMIM11AP58511 58 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 PRPS1P60891 318 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 BSPH1Q075Z2 132 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 PMS2P3Q13401 168 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 LAPTM4AQ15012 233 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 PQLC1Q8N2U9 271 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 GPR137CQ8N3F9 429 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 OR52N5Q8NH56 324 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 TMEM255BQ8WV15 326 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.24
APOA1-201ENST00000236850 FBXW5Q969U6 566 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 BOD1Q96IK1 185 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 DHRS1Q96LJ7 313 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 SLC17A5Q9NRA2 495 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
APOA1-201ENST00000236850 LYVE1Q9Y5Y7 322 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 SLC25A15Q9Y619 301 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 MTORP42345 2549 aa13.54□□□□□ -0.24
APOA1-201ENST00000236850 ACANP16112 2415 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
APOA1-201ENST00000236850 PIP5K1CO60331 668 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 E2F6O75461 281 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 HIST1H2ABP04908 130 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
APOA1-201ENST00000236850 SELENOPP49908 381 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 NKX6-1P78426 367 aaPredicted RBP13.53□□□□□ -0.24
APOA1-201ENST00000236850 PUDPQ08623 228 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 PODNL1Q6PEZ8 512 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 HIST3H2AQ7L7L0 130 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 KDM8Q8N371 416 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 ICA1LQ8NDH6 482 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 OR5J2Q8NH18 312 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 BDH2Q9BUT1 245 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 FKRPQ9H9S5 495 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 NANSQ9NR45 359 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 FAIMQ9NVQ4 179 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
APOA1-201ENST00000236850 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
APOA1-201ENST00000236850 FLNAP21333 2647 aaKnown RBP13.52□□□□□ -0.24
APOA1-201ENST00000236850 A0A087WUU8 490 aa13.52□□□□□ -0.25
APOA1-201ENST00000236850 A0A1W2PRQ8 180 aa13.52□□□□□ -0.25
APOA1-201ENST00000236850 SAC3D1A6NKF1 404 aa13.52□□□□□ -0.25
APOA1-201ENST00000236850 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms