RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CYB561P49447 251 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 HCCSP53701 268 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 OR12D2P58182 307 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 C1orf140Q5VVS0 124 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 TMEM91Q6ZNR0 172 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 DCDC5Q6ZRR9 648 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 VASH1Q7L8A9 365 aaPredicted RBP20.37■□□□□ 0.85
CDX1-201ENST00000231656 SLC35F2Q8IXU6 374 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 SNIP1Q8TAD8 396 aaKnown RBP20.37■□□□□ 0.85
CDX1-201ENST00000231656 FRMD6Q96NE9 622 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 HDHD5Q9BXW7 423 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 DMXL2Q8TDJ6 3036 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 A6NL46 340 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 J3QLW9 94 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 MAGEB3O15480 346 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 SERPINI2O75830 405 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 ZNF19P17023 458 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 CD53P19397 219 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 NAA10P41227 235 aaPredicted RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 KRR1Q13601 381 aaKnown RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 MESTQ5EB52 335 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 FAM69AQ5T7M9 428 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 GPR139Q6DWJ6 353 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 ZNF227Q86WZ6 799 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 CENPSQ8N2Z9 138 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 NTNG2Q96CW9 530 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 ANGPTL4Q9BY76 406 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 TPK1Q9H3S4 243 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 PROK2Q9HC23 129 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 MED11Q9P086 117 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 GRHPRQ9UBQ7 328 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 PLEKHB1Q9UF11 243 aaPredicted RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 IGLV3-32A0A0A0MS00 114 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 PLPP2O43688 288 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 SELENOFO60613 162 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 TAS2R43P59537 309 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 OC90Q02509 493 aaPredicted RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 HNRNPA0Q13151 305 aaKnown RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 INSL4Q14641 139 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 INPP5JQ15735 1006 aaPredicted RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 SGCBQ16585 318 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 PARP16Q8N5Y8 322 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 DNAJA3Q96EY1 480 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 NPAS1Q99742 590 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 RPRD1BQ9NQG5 326 aaKnown RBP20.36■□□□□ 0.85
CDX1-201ENST00000231656 ABI3Q9P2A4 366 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 PCDHGB7Q9Y5F8 929 aa20.36■□□□□ 0.85
CDX1-201ENST00000231656 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 CD8B2A6NJW9 211 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 RGS9O75916 674 aaPredicted RBP20.35■□□□□ 0.85
CDX1-201ENST00000231656 F10P00742 488 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 CD8BP10966 210 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 MSX1P28360 303 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 PYCR1P32322 319 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 C5orf46Q6UWT4 87 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 LINC00696Q6ZRV3 163 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 OR6K6Q8NGW6 343 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 OR5J2Q8NH18 312 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 SLC25A36Q96CQ1 311 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 FAM122AQ96E09 287 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 ALG12Q9BV10 488 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 OR11A1Q9GZK7 315 aa20.35■□□□□ 0.85
CDX1-201ENST00000231656 ZNF346Q9UL40 294 aaKnown RBP20.35■□□□□ 0.85
CDX1-201ENST00000231656 ANKRD33BA6NCL7 494 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 CD96P40200 585 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 ID4P47928 161 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 RUNX1T1Q06455 604 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 CDONQ4KMG0 1287 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 AGAP7PQ5VUJ5 663 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 LYPD4Q6UWN0 246 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 SYS1Q8N2H4 156 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 WDSUB1Q8N9V3 476 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 AGAP4Q96P64 663 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 LRFN1Q9P244 771 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 COPS3Q9UNS2 423 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 MOKQ9UQ07 419 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 ETV2O00321 342 aaPredicted RBP20.34■□□□□ 0.85
CDX1-201ENST00000231656 UPK1BO75841 260 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 AHSA1O95433 338 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 GRPRP30550 384 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 TNFSF8P32971 234 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 ACTA2P62736 377 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 ACTG2P63267 376 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 DEFB109BQ30KR1 87 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 TP53I3Q53FA7 332 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 DMKNQ6E0U4 476 aaPredicted RBP20.34■□□□□ 0.85
CDX1-201ENST00000231656 ARL9Q6T311 187 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 OR6S1Q8NH40 331 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 COX4I2Q96KJ9 171 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 TSSK2Q96PF2 358 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 UTP23Q9BRU9 249 aaKnown RBP20.34■□□□□ 0.85
CDX1-201ENST00000231656 MROQ9BYG7 248 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 ST6GALNAC2Q9UJ37 374 aa20.34■□□□□ 0.85
CDX1-201ENST00000231656 SHISA3A0PJX4 238 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 FTCDNL1E5RQL4 147 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 DVL2O14641 736 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 WDPCPO95876 746 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 P04436 131 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 CASRP41180 1078 aa20.33■□□□□ 0.84
CDX1-201ENST00000231656 ARSKQ6UWY0 536 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms