RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 GGHQ92820 318 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 NXPE3Q969Y0 559 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 ANKRD60Q9BZ19 345 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TINAGL1Q9GZM7 467 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TXNL4BQ9NX01 149 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 LUZP4Q9P127 313 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 RCE1Q9Y256 329 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 SELEP16581 610 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 LYPD4Q6UWN0 246 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM255BQ8WV15 326 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 P2RY12Q9H244 342 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 UBBP0CG47 229 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 UBCP0CG48 685 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PRKACAP17612 351 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 AADACP22760 399 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 RPS27AP62979 156 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 UBA52P62987 128 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 MLLT11Q13015 90 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PIWIL3Q7Z3Z3 882 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 OR10X1Q8NGY0 326 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 CNOT2Q9NZN8 540 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 A0A0B4J2A0 478 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 AKR7A3O95154 331 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TGM6O95932 706 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 MAKP20794 623 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PAX6P26367 422 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 GABRA4P48169 554 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 UBE2G2P60604 165 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 ABHD11Q8NFV4 315 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 ABHD6Q9BV23 337 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 IL37Q9NZH6 218 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 MYH9P35579 1960 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 TRGV8A0A0C4DH27 118 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 APOA2P02652 100 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 F11P03951 625 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 NUDT7P0C024 238 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 SNRPBP14678 240 aaKnown RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 NDUFA6P56556 154 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ARHGAP11BQ3KRB8 267 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 CNTN4Q8IWV2 1026 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TMIGD2Q96BF3 282 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ARRDC1-AS1Q9H2J1 176 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 SEMA4GQ9NTN9 838 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 GPLD1P80108 840 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ILKQ13418 452 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 VRK3Q8IV63 474 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TM4SF18Q96CE8 201 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 PDXPQ96GD0 296 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 C6orf106Q9H6K1 298 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 RGPD5Q99666 1765 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 C4orf47A7E2U8 309 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 FOSL1P15407 271 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM52BQ4KMG9 183 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ARRDC2Q8TBH0 407 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 BARHL1Q9BZE3 327 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ARNTLO00327 626 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TNFSF15O95150 251 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 HBG1P69891 147 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 HBG2P69892 147 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 PGBD5Q8N414 524 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 FNDC8Q8TC99 324 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 C11orf40Q8WZ69 217 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 CPPED1Q9BRF8 314 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 NRSN2Q9GZP1 204 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 OR5H14A6NHG9 310 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 OR5H1A6NKK0 313 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 SSTR2P30874 369 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 DCXRQ7Z4W1 244 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 WDR5BQ86VZ2 330 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 RASD2Q96D21 266 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 RTL8AQ9BWD3 113 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 UBE2ZQ9H832 354 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 PROCRQ9UNN8 238 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 AGAP14A8MT82 685 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 GRB2P62993 217 aaKnown RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 SLC35A2P78381 396 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TLE1Q04724 770 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 EBPQ15125 230 aaKnown RBP12.22□□□□□ -0.45
COL1A1-201ENST00000225964 LPCAT3Q6P1A2 487 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
COL1A1-201ENST00000225964 NANPQ8TBE9 248 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 SLC39A9Q9NUM3 307 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 MYH4Q9Y623 1939 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms