RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TFP02787 698 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 SHC1P29353 583 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 UGT2B10P36537 528 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 NAA10P41227 235 aaPredicted RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 GPR85P60893 370 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 ZNF85Q03923 595 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 TOMM20Q15388 145 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 EEF1A1P5Q5VTE0 462 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 USP43Q70EL4 1123 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 SLC35F2Q8IXU6 374 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 PM20D2Q8IYS1 436 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 KDM8Q8N371 416 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 GALNT16Q8N428 558 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 KBTBD8Q8NFY9 601 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 TBC1D15Q8TC07 691 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 MIB2Q96AX9 1013 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 SRA1Q9HD15 236 aaKnown RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 DEPPQ9NTK1 212 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 VSX1Q9NZR4 365 aaPredicted RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 BOKQ9UMX3 212 aaPredicted RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 NPIPA1Q9UND3 350 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 STUB1Q9UNE7 303 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 A6NIZ1 184 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 DCTN6O00399 190 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 MT-ND5P03915 603 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 OPN1LWP04000 364 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 HLA-DOBP13765 273 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 WT1P19544 449 aaPredicted RBP16.28■□□□□ 0.2
VIM-201ENST00000224237 PYCR1P32322 319 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 OR2B6P58173 313 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 RAP1BP61224 184 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 RPS3AP61247 264 aaKnown RBP16.28■□□□□ 0.2
VIM-201ENST00000224237 RAP1AP62834 184 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 TUBA1BP68363 451 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 HSF1Q00613 529 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 POU3F1Q03052 451 aaPredicted RBP16.28■□□□□ 0.2
VIM-201ENST00000224237 MELKQ14680 651 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 RTP5Q14D33 572 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 MOGQ16653 247 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 FAM205BPQ63HN1 556 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 TMPPEQ6ZT21 453 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 TUBA1AQ71U36 451 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 OR6V1Q8N148 313 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 ASB10Q8WXI3 467 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 TIMP4Q99727 224 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 DCSTAMPQ9H295 470 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 ISG20L2Q9H9L3 353 aaKnown RBP16.28■□□□□ 0.2
VIM-201ENST00000224237 ZFP64Q9NPA5 681 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 TRIM36Q9NQ86 728 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 FKBP7Q9Y680 259 aa16.28■□□□□ 0.2
VIM-201ENST00000224237 DCDC2BA2VCK2 349 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 ARGFXA6NJG6 315 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 SULT2B1O00204 365 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 SEC14L5O43304 696 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 GFRA3O60609 400 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 SELENOFO60613 162 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 PMS2P2O95744 297 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 WDPCPO95876 746 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 LALBAP00709 142 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 PRKAR1AP10644 381 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 TGFBR1P36897 503 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 ACTA2P62736 377 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 RAC1P63000 192 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 ACTG2P63267 376 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 SLC35A1P78382 337 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 OR1C1Q15619 314 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 LINC00696Q6ZRV3 163 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 KLBQ86Z14 1044 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 MRPL48Q96GC5 212 aaKnown RBP16.27■□□□□ 0.2
VIM-201ENST00000224237 SIGLEC12Q96PQ1 595 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 FAM173AQ9BQD7 235 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 NUAK2Q9H093 628 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 BABAM2Q9NXR7 383 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 MRPS18CQ9Y3D5 142 aaKnown RBP16.27■□□□□ 0.2
VIM-201ENST00000224237 ZFHX4Q86UP3 3567 aa16.27■□□□□ 0.2
VIM-201ENST00000224237 GJE1A6NN92 205 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 FAM171A2A8MVW0 826 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 GPX5O75715 221 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 IFNGR1P15260 489 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 GABRA5P31644 462 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 CRYBB2P43320 205 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 CENPAP49450 140 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 SOX8P57073 446 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 HSF2Q03933 536 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 ZNF239Q16600 458 aaKnown RBP16.27■□□□□ 0.19
VIM-201ENST00000224237 DGUOKQ16854 277 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 ZNF829Q3KNS6 432 aaPredicted RBP16.27■□□□□ 0.19
VIM-201ENST00000224237 LINC00299Q6ZSB3 139 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 SLC35D2Q76EJ3 337 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 ZBTB46Q86UZ6 589 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 SMAP2Q8WU79 429 aaPredicted RBP16.27■□□□□ 0.19
VIM-201ENST00000224237 EXOSC4Q9NPD3 245 aaKnown RBP16.27■□□□□ 0.19
VIM-201ENST00000224237 B3GAT1Q9P2W7 334 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 SSR3Q9UNL2 185 aa16.27■□□□□ 0.19
VIM-201ENST00000224237 PNMA8CA0A1B0GUJ8 204 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 NKX2-8O15522 239 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 P2RY4P51582 365 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms