RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nlrc3Q5DU56 1064 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr3Q60879 313 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Pcyt1bQ811Q9 369 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 RfkQ8CFV9 155 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Vmn1r17Q8R2D8 303 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ndc1Q8VCB1 673 aaKnown RBP13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr1417Q8VGJ6 315 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Pcdhga6Q91XY2 932 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 4933402D24RikQ9D4D3 167 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Hmg20aQ9DC33 346 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr545Q9WU94 316 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Xpr1Q9Z0U0 695 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 BptfA2A654 3036 aaKnown RBP13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ighv1-42A0A0A6YY38 117 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Cd101A8E0Y8 1033 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Zfp707F6QUN2 391 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 B3galt1O54904 326 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Crybb2P62696 205 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr18Q0VAX9 331 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Taar6Q5QD13 345 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 P4ha2Q60716 537 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Foxb2Q64733 428 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr967Q7TRA6 310 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 SetmarQ80UJ9 309 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Nup107Q8BH74 926 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Rab39aQ8BHD0 217 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 AntxrlQ8BVM2 641 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Mblac1Q8BWY4 260 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr1423Q8VFV0 310 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr807Q8VGI9 311 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Prmt3Q922H1 532 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 NansQ99J77 359 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Q99LU8 229 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Q9DAS2 200 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Paqr4Q9JJE4 273 aa13.46□□□□□ -0.25
Nup88-202ENSMUST00000108530 Smpd5D6MZJ6 483 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cdk2ap1O35207 114 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 C1dO35473 141 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 MscO88940 201 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Efna1P52793 205 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Limk1P53668 647 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rps25P62852 125 aaKnown RBP13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gcnt2P97402 401 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 HlxQ61670 476 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1229Q7TQZ9 311 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Znf8Q8BGV5 572 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tm9sf4Q8BH24 643 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Clrn3Q8BHH8 226 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc35f4Q8BZK4 485 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Lsm14aQ8K2F8 462 aaKnown RBP13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr215Q8VF82 310 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr341Q8VGK9 313 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Abtb1Q99LJ2 478 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zmynd19Q9CQG3 227 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Atp5f1Q9CQQ7 256 aaKnown RBP13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Glipr2Q9CYL5 154 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tex47Q9D5W8 253 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zfp84Q9D654 559 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 LhppQ9D7I5 270 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Bco1Q9JJS6 566 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc35a2Q9R0M8 390 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Phf3B2RQG2 2025 aaKnown RBP13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm28576A0A087WRP6 222 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1025-ps1A0A140T8K3 312 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr560A0A1B0GSU5 314 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Btbd35f28A2CFD5 498 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zfp760E9QAF5 666 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Btbd35f30J3QML3 498 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r120K7N6J6 305 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ntn1O09118 604 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Klrg1O88713 188 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Scn1bP97952 218 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Klra2Q60660 288 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zfp748Q7TPL6 888 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 SelenoiQ80TA1 398 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 TifabQ8JZM6 147 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmem221Q8K071 230 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 MepeQ8K4L6 441 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r200Q8R281 312 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Hsd17b13Q8VCR2 304 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Isyna1Q9JHU9 557 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Dusp13Q9QYJ7 198 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Syt8Q9R0N6 395 aa13.45□□□□□ -0.26
Nup88-202ENSMUST00000108530 Trbc2A0A075B5J4 173 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cd209fD3Z1H5 274 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ccdc7bE9Q9Y3 381 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 P01851 173 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Galk2Q68FH4 458 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tas2r107Q7M725 308 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tns4Q8BZ33 696 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Steap3Q8CI59 488 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Il17rcQ8K4C2 698 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Nectin4Q8R007 508 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1395Q8VGD7 317 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gid4Q9CPY6 217 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mmp1aQ9EPL5 464 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Phf1Q9Z1B8 559 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Btbd8D3YUB6 377 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cdc25bP30306 576 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rpl18P35980 188 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms