RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C17orf67Q0P5P2 114 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 PHF19Q5T6S3 580 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 EEF1A1P5Q5VTE0 462 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC6A19Q695T7 634 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 C5orf46Q6UWT4 87 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 CPEB2Q7Z5Q1 589 aaKnown RBP17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 KCTD20Q7Z5Y7 419 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 OR2I1PQ8NGU4 316 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 TMEM234Q8WY98 164 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 HGDQ93099 445 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC25A36Q96CQ1 311 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 DNAJA3Q96EY1 480 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 PDCD1LG2Q9BQ51 273 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 CYSLTR2Q9NS75 346 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 OCIAD1Q9NX40 245 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 LINC00854A0A1B0GVQ3 168 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 ANKUB1A6NFN9 424 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 FAM25AB3EWG3 89 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 FAM25CB3EWG5 89 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 FAM25GB3EWG6 89 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 DXOO77932 396 aaKnown RBP17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 NAGAP17050 411 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 LCN10Q6JVE6 187 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 TMEM205Q6UW68 189 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 UNQ9370/PRO34162Q6UXP9 181 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 BPHLQ86WA6 291 aaPredicted RBP17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 CDC20BQ86Y33 519 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 OR5L2Q8NGL0 311 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 PHYHIPQ92561 330 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 CRB3Q9BUF7 120 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 MFRPQ9BY79 579 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 SACM1LQ9NTJ5 587 aa17.83■□□□□ 0.44
PCDHB11-202ENST00000624887 C11orf98E9PRG8 122 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 ARHGEF9O43307 516 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 GSTT2P0CG29 244 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 GSTT2BP0CG30 244 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 FGF5P12034 268 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 PRKCAP17252 672 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 DAB2P98082 770 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 CLPPQ16740 277 aaPredicted RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 TRILQ7L0X0 811 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 RNF138Q8WVD3 245 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 RNF166Q96A37 237 aaPredicted RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 GFM1Q96RP9 751 aaKnown RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 C11orf54Q9H0W9 315 aaPredicted RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 SYT4Q9H2B2 425 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 MEN1O00255 615 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 PLA2G10O15496 165 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 OR2T1O43869 369 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 CYC1P08574 325 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 TACSTD2P09758 323 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 SUMO3P55854 103 aaPredicted RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 CARTPTQ16568 116 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 TRIQKQ629K1 86 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 OR5M10Q6IEU7 315 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 ST8SIA1Q92185 356 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 ADAD1Q96M93 576 aaKnown RBP17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 MNTQ99583 582 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 ZCCHC4Q9H5U6 513 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 B3GAT2Q9NPZ5 323 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 EXTL2Q9UBQ6 330 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 KLHDC2Q9Y2U9 406 aa17.82■□□□□ 0.44
PCDHB11-202ENST00000624887 PATE3B3GLJ2 98 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 PSMD9O00233 223 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 XKRYO14609 159 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 AHSA1O95433 338 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 TPTEP56180 551 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 NANOS3P60323 173 aaKnown RBP17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 RPL27P61353 136 aaKnown RBP17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 SELENBP1Q13228 472 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 IL11RAQ14626 422 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 SLC25A35Q3KQZ1 300 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 MRPL14Q6P1L8 145 aaKnown RBP17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF517Q6ZMY9 492 aaPredicted RBP17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 AKAP14Q86UN6 197 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 PM20D2Q8IYS1 436 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF519Q8TB69 540 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 HAVCR2Q8TDQ0 301 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 TTC9Q92623 222 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 OR14A2Q96R54 314 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 SNX18Q96RF0 628 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 OR11A1Q9GZK7 315 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 C19orf25Q9UFG5 118 aaPredicted RBP17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF281Q9Y2X9 895 aa17.81■□□□□ 0.44
PCDHB11-202ENST00000624887 A0A1W2PPK0 400 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 TVP23AA6NH52 213 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 NOTOA8MTQ0 251 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 B4DXG7 233 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 TRIM3O75382 744 aaPredicted RBP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 NPR2P20594 1047 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 AHCYP23526 432 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 OR2B6P58173 313 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 ACKR1Q16570 336 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 AGAP6Q5VW22 663 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 IL20RBQ6UXL0 311 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 FAM220AQ7Z4H9 259 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 SAMD12Q8N8I0 201 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 C19orf18Q8NEA5 215 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 OR6S1Q8NH40 331 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CEP76Q8TAP6 659 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms