RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 RNF175Q8N4F7 328 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PACRGLQ8N7B6 248 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 LINC01555Q8NAE3 123 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 OR2L5Q8NG80 312 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 OR2A1Q8NGT9 310 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 OR10A6Q8NH74 314 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 NT5CQ8TCD5 201 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 LMX1AQ8TE12 382 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 RLN3Q8WXF3 142 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 LZICQ8WZA0 190 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 N4BP2L2Q92802 583 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 CLDN23Q96B33 292 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 SLC45A3Q96JT2 553 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PKP2Q99959 881 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 SLC35A5Q9BS91 424 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 C9orf16Q9BUW7 83 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ABCG4Q9H172 646 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ACTL8Q9H568 366 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 UCK1Q9HA47 277 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 HHATLQ9HCP6 504 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ARMC1Q9NVT9 282 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 IRAK4Q9NWZ3 460 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 MS4A12Q9NXJ0 267 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 EPHA6Q9UF33 1036 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FBXL17Q9UF56 701 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ANGPT4Q9Y264 503 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PCDHGA5Q9Y5G8 931 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ORC6Q9Y5N6 252 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ZNF780BQ9Y6R6 833 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 AGRNO00468 2067 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ANKRD12Q6UB98 2062 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PLXND1Q9Y4D7 1925 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 CELSR3Q9NYQ7 3312 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 RNF103-CHMP3A0A140T963 221 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 A6NCN8 305 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 MSGN1A6NI15 193 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 GABRR3A8MPY1 467 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 H0YJX3 145 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 BTN3A3O00478 584 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PLPP1O14494 284 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 ETHE1O95571 254 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PDGFBP01127 241 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 FAM58BPP0C7Q3 252 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 UQCRC2P22695 453 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 CPN2P22792 545 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PCGF2P35227 344 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 CRATP43155 626 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 KHKP50053 298 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PLA2G16P53816 162 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OR4D2P58180 307 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 UBE2IP63279 158 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 MS4A2Q01362 244 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 EPS8Q12929 822 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 MED21Q13503 144 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 C1orf61Q13536 156 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PDE7AQ13946 482 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 VEZF1Q14119 521 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 ZNF239Q16600 458 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 ZNF630Q2M218 657 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 LRRC23Q53EV4 343 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 TPRG1LQ5T0D9 272 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OGFRL1Q5TC84 451 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 LYSMD4Q5XG99 296 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 FAM219BQ5XKK7 198 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OR52E8Q6IFG1 317 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 IRGCQ6NXR0 463 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 PAQR7Q86WK9 346 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SLC22A18ASQ8N1D0 253 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 DEFB119Q8N690 84 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 TTC29Q8NA56 475 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 ZNF740Q8NDX6 193 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OR52E4Q8NGH9 312 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 CCL4L1Q8NHW4 92 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SLC37A2Q8TED4 501 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 RASSF5Q8WWW0 418 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OR5P2Q8WZ92 322 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 EXOSC8Q96B26 276 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 MS4A6EQ96DS6 147 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 CENPNQ96H22 339 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 PGAM5Q96HS1 289 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 MAGED4Q96JG8 741 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SLC35G5Q96KT7 338 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 BTBD9Q96Q07 612 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SERINC2Q96SA4 455 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 C17orf62Q9BQA9 187 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 TRAF4Q9BUZ4 470 aaPredicted RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 LRRC61Q9BV99 259 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 ITPAQ9BY32 194 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SPNS1Q9H2V7 528 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 KAT8Q9H7Z6 458 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 GORASP2Q9H8Y8 452 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 TPT1P8Q9HAU6 139 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 C3orf14Q9HBI5 128 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 TM9SF3Q9HD45 589 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 OLAHQ9NV23 265 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 HRASLS2Q9NWW9 162 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 SPHK1Q9NYA1 384 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 TAS2R9Q9NYW1 312 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms