RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 DHDDSQ86SQ9 333 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 PATL1Q86TB9 770 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 PRIMA1Q86XR5 153 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 HIPK1Q86Z02 1210 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 UEVLDQ8IX04 471 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 TMEM123Q8N131 208 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 ZNF540Q8NDQ6 660 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 NUP37Q8NFH4 326 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 C10orf105Q8TEF2 133 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 CKAP2Q8WWK9 683 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 RASSF5Q8WWW0 418 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 MAGEB18Q96M61 343 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 OR2M2Q96R28 347 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 TNFRSF13CQ96RJ3 184 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 SLC19A3Q9BZV2 496 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 ZNF442Q9H7R0 627 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 GPR35Q9HC97 309 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 CA10Q9NS85 328 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 TMEM160Q9NX00 188 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 MRPL39Q9NYK5 338 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 SLAMF8Q9P0V8 285 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 FBXL3Q9UKT7 428 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 USP22Q9UPT9 525 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 MOKQ9UQ07 419 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 NDUFAF1Q9Y375 327 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 RAI1Q7Z5J4 1906 aaPredicted RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 A0A096LNT2 108 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ZNF99A8MXY4 864 aaPredicted RBP6.61□□□□□ -1.35
NPC1-208ENST00000590301 CHP2O43745 196 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 TPST1O60507 370 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 LILRA1O75019 489 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 MFN2O95140 757 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 CECR9P0C854 216 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PTNP21246 168 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PPOXP50336 477 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PDLIM4P50479 330 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 IL1RL1Q01638 556 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PUDPQ08623 228 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PMS2P3Q13401 168 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 OR1Q1Q15612 314 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 MST1LQ2TV78 715 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 CEACAM16Q2WEN9 425 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 TMEM249Q2WGJ8 235 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PODNL1Q6PEZ8 512 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 LINGO2Q7L985 606 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 SLC46A3Q7Z3Q1 461 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PXKQ7Z7A4 578 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 PTOV1Q86YD1 416 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 C20orf196Q8IYI0 205 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 C10orf111Q8N326 155 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 KDM8Q8N371 416 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ZNF525Q8N782 197 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 MAPK1IP1LQ8NDC0 245 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 RNF217Q8TC41 542 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 NANOS1Q8WY41 292 aaKnown RBP6.61□□□□□ -1.35
NPC1-208ENST00000590301 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 FBXO17Q96EF6 278 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 MPP4Q96JB8 637 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ANKRD27Q96NW4 1050 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 CGREF1Q99674 301 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 SH3GL1Q99961 368 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 NELFAQ9H3P2 528 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 IKZF5Q9H5V7 419 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ZNF385DQ9H6B1 395 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 CRLF2Q9HC73 371 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 NPHS2Q9NP85 383 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 YAE1D1Q9NRH1 226 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ZNF446Q9NWS9 450 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 LPAR3Q9UBY5 353 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 CDC42EP3Q9UKI2 254 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 ARID1AO14497 2285 aa6.61□□□□□ -1.35
NPC1-208ENST00000590301 A0A096LPE4 126 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 LOC390937A0A1W2PQ73 354 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 ZNF726A6NNF4 738 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 PLPP3O14495 311 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 EDF1O60869 148 aaKnown RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 OR6A2O95222 327 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 NPPAP01160 153 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 BGLAPP02818 100 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 OR4A8P0C604 315 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 USF1P22415 310 aaPredicted RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 AQP1P29972 269 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 PCGF2P35227 344 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 GZMKP49863 264 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 IDH3GP51553 393 aaPredicted RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 CDH12P55289 794 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 POU3F1Q03052 451 aaPredicted RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 LGALS3BPQ08380 585 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 NFYCQ13952 458 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 CYLC2Q14093 348 aaPredicted RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 ADIPOQQ15848 244 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 CHRFAM7AQ494W8 412 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 GLIPR1L2Q4G1C9 344 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 COQ5Q5HYK3 327 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 C6orf52Q5T4I8 152 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 CYB5R2Q6BCY4 276 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 LINC00114Q6XXX2 140 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 COMTD1Q86VU5 262 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 C10orf53Q8N6V4 93 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms