RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SC5DO75845 299 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ZNF432O94892 652 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 DKK1O94907 266 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 GYPBP06028 91 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 MRPL3P09001 348 aaKnown RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 CLUP10909 449 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 CCL4P13236 92 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 MYL9P24844 172 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 GTF2E2P29084 291 aaKnown RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 GRPRP30550 384 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 PYCR1P32322 319 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 CD79BP40259 229 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 DAP3P51398 398 aaKnown RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 OR12D2P58182 307 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 CDC20Q12834 499 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 CDK5R1Q15078 307 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 BTBD16Q32M84 506 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 FAM69BQ5VUD6 431 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 LCN10Q6JVE6 187 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 DNM1P34Q6PK57 102 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 XKRXQ6PP77 449 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 TMEM91Q6ZNR0 172 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 H1FNTQ75WM6 255 aaPredicted RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 ASCL5Q7RTU5 278 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 FAM220AQ7Z4H9 259 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 GDPD1Q8N9F7 314 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ADPRHL1Q8NDY3 354 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 OR6K6Q8NGW6 343 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 SLC25A43Q8WUT9 341 aaPredicted RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 ASB17Q8WXJ9 295 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ZBTB8AQ96BR9 441 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RASD2Q96D21 266 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 SMIM19Q96E16 107 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 KLHL15Q96M94 604 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 FRMD6Q96NE9 622 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RASL10BQ96S79 203 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 TTYH2Q9BSA4 534 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 BARHL1Q9BZE3 327 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RPRD1BQ9NQG5 326 aaKnown RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RABL2AQ9UBK7 228 aaPredicted RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 PLEKHB1Q9UF11 243 aaPredicted RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 FBXL4Q9UKA2 621 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 WIF1Q9Y5W5 379 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ASXL3Q9C0F0 2248 aa9.4□□□□□ -0.91
VPS25-203ENST00000589520 ZNF292O60281 2723 aa9.4□□□□□ -0.91
VPS25-203ENST00000589520 UNC79Q9P2D8 2635 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 PRSS37A4D1T9 235 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 FTCDNL1E5RQL4 147 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 OR2J2O76002 312 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 PTTG1O95997 202 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 APOA1P02647 267 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 TFP02787 698 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 F13BP05160 661 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 COX6A1P12074 109 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZNF28P17035 718 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ACVR1BP36896 505 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 CASP3P42574 277 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 SSPNQ14714 243 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 MESTQ5EB52 335 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 VASNQ6EMK4 673 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZNF544Q6NX49 715 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ARL9Q6T311 187 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 C6orf15Q6UXA7 325 aaPredicted RBP9.39□□□□□ -0.91
VPS25-203ENST00000589520 HDDC2Q7Z4H3 204 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 PXKQ7Z7A4 578 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZFP41Q8N8Y5 198 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZNF524Q96C55 264 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 C8orf44Q96CB5 159 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 SLC25A36Q96CQ1 311 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 NXPE2Q96DL1 559 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 LIN37Q96GY3 246 aaPredicted RBP9.39□□□□□ -0.91
VPS25-203ENST00000589520 PGLYRP3Q96LB9 341 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 SGCZQ96LD1 299 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ADAD1Q96M93 576 aaKnown RBP9.39□□□□□ -0.91
VPS25-203ENST00000589520 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 MRI1Q9BV20 369 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 B3GNT4Q9C0J1 378 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 TPK1Q9H3S4 243 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 WDR76Q9H967 626 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ALKBH4Q9NXW9 302 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 MED11Q9P086 117 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 PISDQ9UG56 409 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ST6GALNAC2Q9UJ37 374 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 B9D1Q9UPM9 204 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 LOXL2Q9Y4K0 774 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 PCDHGA1Q9Y5H4 931 aa9.39□□□□□ -0.91
VPS25-203ENST00000589520 NSG1A0A0A6YYJ2 146 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 FABP12A6NFH5 140 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF879B4DU55 563 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 CDK2AP1O14519 115 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 PDCD5O14737 125 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ARHGEF9O43307 516 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms