RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	SIGLEC12	Q96PQ1	595 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	CDRT15	Q96T59	188 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	HBEGF	Q99075	208 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	AICDA	Q9GZX7	198 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	DDX31	Q9H8H2	851 aa	Known RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	METTL7A	Q9H8H3	244 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	TMEM165	Q9HC07	324 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	KCNK9	Q9NPC2	374 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	MIEF1	Q9NQG6	463 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	SDHAF3	Q9NRP4	125 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	C20orf141	Q9NUB4	165 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	TEX10	Q9NXF1	929 aa	Predicted RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	STX18	Q9P2W9	335 aa	Known RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	HSPB7	Q9UBY9	170 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	UBQLN2	Q9UHD9	624 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	ERVK-19	Q9WJR5	959 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	CFL2	Q9Y281	166 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	SLC9A8	Q9Y2E8	581 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	YARS2	Q9Y2Z4	477 aa	Known RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	FIS1	Q9Y3D6	152 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	ATG4B	Q9Y4P1	393 aa		4.23	□□□□□ -1.73
ZNF540-204	ENST00000586792	TRGV8	A0A0C4DH27	118 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792		A0A1B0GUH1	482 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792		A0A1W2PN81	502 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	GXYLT2	A0PJZ3	443 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	NPIPB13	A6NJU9	1138 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	NPIPB4	C9JG80	1138 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	USP17L23	D6RBM5	183 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	LGALS8	O00214	317 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	WWP2	O00308	870 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	MANBA	O00462	879 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	RGS16	O15492	202 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	RGS14	O43566	566 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TMPRSS11D	O60235	418 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PCDH7	O60245	1069 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	NME2P1	O60361	137 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CDC40	O60508	579 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PLIN3	O60664	434 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	EED	O75530	441 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PRKRA	O75569	313 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	OR2J2	O76002	312 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CBX6	O95503	412 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	ETHE1	O95571	254 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792		P04436	131 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	SP1	P08047	785 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	ANXA4	P09525	319 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	SLC35E2	P0CK97	266 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PRPS2	P11908	318 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CSNK2A2	P19784	350 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	IL32	P24001	234 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TIA1	P31483	386 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CHRNA7	P36544	502 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CDKN1B	P46527	198 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	SMS	P52788	366 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PRKAG1	P54619	331 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	DNAJB13	P59910	316 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	B2M	P61769	119 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	KCNJ2	P63252	427 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CYLC2	Q14093	348 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	IQCC	Q4KMZ1	466 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	UNC50	Q53HI1	259 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CARD17	Q5XLA6	110 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	C18orf63	Q68DL7	685 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TMEM108	Q6UXF1	575 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	IL20RB	Q6UXL0	311 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	ZNF600	Q6ZNG1	722 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	RTL4	Q6ZR62	310 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	CCDC121	Q6ZUS5	278 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	COMMD6	Q7Z4G1	85 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	GRAMD2A	Q8IUY3	354 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	DND1	Q8IYX4	353 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	GHDC	Q8N2G8	530 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	UBE2J2	Q8N2K1	259 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	LRRC25	Q8N386	305 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	METTL4	Q8N3J2	472 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	FADS6	Q8N9I5	356 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	APCDD1L	Q8NCL9	501 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	MDS2	Q8NDY4	140 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	NFAM1	Q8NET5	270 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TMEM185A	Q8NFB2	350 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	BPIFC	Q8NFQ6	507 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	OR56B1	Q8NGI3	324 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	OR10S1	Q8NGN2	331 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	MPLKIP	Q8TAP9	179 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	OSR1	Q8TAX0	266 aa	Predicted RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PAQR8	Q8TEZ7	354 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	AGAP11	Q8TF27	550 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	AEN	Q8WTP8	325 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TSEN15	Q8WW01	171 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	PPWD1	Q96BP3	646 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	SCMH1	Q96GD3	660 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	MED30	Q96HR3	178 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TRNT1	Q96Q11	434 aa	Known RBP	4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	ASCL2	Q99929	193 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	TMEM204	Q9BSN7	226 aa		4.22	□□□□□ -1.73
ZNF540-204	ENST00000586792	THAP7	Q9BT49	309 aa	Predicted RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms