RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 ROR2Q01974 943 aaKnown RBP12.23□□□□□ -0.45
GGA3-215ENST00000582821 POU3F1Q03052 451 aaPredicted RBP12.23□□□□□ -0.45
GGA3-215ENST00000582821 KRT72Q14CN4 511 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 TBRG1Q3YBR2 411 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 ZNF672Q499Z4 452 aaPredicted RBP12.23□□□□□ -0.45
GGA3-215ENST00000582821 IFI44LQ53G44 452 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 ANKRD16Q6P6B7 361 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 HIST3H2AQ7L7L0 130 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 SLC46A3Q7Z3Q1 461 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 VTCN1Q7Z7D3 282 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 PGAM4Q8N0Y7 254 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 GPR137CQ8N3F9 429 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 TMEM255BQ8WV15 326 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
GGA3-215ENST00000582821 HIST1H2ACQ93077 130 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 ALKBH3Q96Q83 286 aaPredicted RBP12.23□□□□□ -0.45
GGA3-215ENST00000582821 CCL19Q99731 98 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 GPR35Q9HC97 309 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 ARL8BQ9NVJ2 186 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 RPS6KA6Q9UK32 745 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 VPS13CQ709C8 3753 aa12.23□□□□□ -0.45
GGA3-215ENST00000582821 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 A0A1W2PR80 420 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SLC35F4A4IF30 521 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 ZNF726A6NNF4 738 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 CLOCKO15516 846 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 OR7A10O76100 309 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 FAM107AO95990 144 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SERPINA1P01009 418 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 TSPAN19P0C672 248 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 DANCRP0C864 163 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 FUT1P19526 365 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 CD40P25942 277 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 ZNF83P51522 516 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 ADAM8P78325 824 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SLC25A3Q00325 362 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 C3orf36Q3SXR2 165 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SPATS1Q496A3 300 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SHEQ5VZ18 495 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 GLYATQ6IB77 296 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 ZNF627Q7L945 461 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 TGIF2LYQ8IUE0 185 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 CCDC36Q8IYA8 594 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 OFCC1Q8IZS5 231 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 LRRC17Q8N6Y2 441 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 FAM169BQ8N8A8 192 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 OR6X1Q8NH79 312 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 FBXW5Q969U6 566 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 ADAD1Q96M93 576 aaKnown RBP12.22□□□□□ -0.45
GGA3-215ENST00000582821 EMC6Q9BV81 110 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 GORASP2Q9H8Y8 452 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 MOV10Q9HCE1 1003 aaKnown RBP12.22□□□□□ -0.45
GGA3-215ENST00000582821 DCAF13Q9NV06 445 aaKnown RBP12.22□□□□□ -0.45
GGA3-215ENST00000582821 MED29Q9NX70 200 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 NDE1Q9NXR1 346 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 CD300AQ9UGN4 299 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 MED31Q9Y3C7 131 aa12.22□□□□□ -0.45
GGA3-215ENST00000582821 RTTNQ86VV8 2226 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 KPNA4O00629 521 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 ABCD4O14678 606 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 FFAR1O14842 300 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 SMPD2O60906 423 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 PRSS23O95084 383 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 ZNF682O95780 498 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 IFNGR1P15260 489 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 CDH2P19022 906 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 MNAT1P51948 309 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 ARF1P84077 181 aaKnown RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 CEACAM16Q2WEN9 425 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 HIKESHIQ53FT3 197 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 GKAP1Q5VSY0 366 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 KLHL24Q6TFL4 600 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 FKBP9P1Q75LS8 142 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 SLC35D2Q76EJ3 337 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 RNF113BQ8IZP6 322 aaKnown RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 PFN4Q8NHR9 129 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 SMAP2Q8WU79 429 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 FAM162AQ96A26 154 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 GSX2Q9BZM3 304 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 NELFAQ9H3P2 528 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 CRLF2Q9HC73 371 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 MAN2C1Q9NTJ4 1040 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 ZNF701Q9NV72 531 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 ADA2Q9NZK5 511 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 CRNNQ9UBG3 495 aaPredicted RBP12.21□□□□□ -0.45
GGA3-215ENST00000582821 EGFL7Q9UHF1 273 aa12.21□□□□□ -0.45
GGA3-215ENST00000582821 SNX13Q9Y5W8 968 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms