RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ZNF382Q96SR6 550 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 NIPSNAP3BQ9BS92 247 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 ANGPTL4Q9BY76 406 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 SPATA7Q9P0W8 599 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 GSTK1Q9Y2Q3 226 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 IGHV3OR16-8A0A075B7F1 116 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 IGHV3-74A0A0B4J1X5 117 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 SYCE3A1L190 88 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 CLDN5O00501 218 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 SSX5O60225 188 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 IGLV6-57P01721 117 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 OPN1MWP04001 364 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 OR56A5P0C7T3 313 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 OPN1MW2P0DN77 364 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 OPN1MW3P0DN78 364 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 PSMA2P25787 234 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 RPS11P62280 158 aaKnown RBP eCLIP0.66□□□□□ -2.3
FOXN3-216ENST00000557496 MXD4Q14582 209 aaPredicted RBP0.66□□□□□ -2.3
FOXN3-216ENST00000557496 KRTAP21-3Q3LHN1 58 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 OR52E8Q6IFG1 317 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 FAM71F2Q6NXP2 309 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 ERASQ7Z444 233 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 SYT14Q8NB59 555 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 ST20-AS1Q8NBB2 130 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 STACQ99469 402 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 TM2D3Q9BRN9 247 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 POPDC2Q9HBU9 364 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 KLHL28Q9NXS3 571 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 CALYQ9NYX4 217 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 COPS3Q9UNS2 423 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 COL5A3P25940 1745 aaPredicted RBP0.66□□□□□ -2.3
FOXN3-216ENST00000557496 DOCK8Q8NF50 2099 aa0.66□□□□□ -2.3
FOXN3-216ENST00000557496 COL11A1P12107 1806 aaPredicted RBP0.66□□□□□ -2.3
FOXN3-216ENST00000557496 XPO1O14980 1071 aaKnown RBP0.65□□□□□ -2.31
FOXN3-216ENST00000557496 RP2O75695 350 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 BCHEP06276 602 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 PCMT1P22061 227 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 ADRA1AP35348 466 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 TNFSF9P41273 254 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 PDIA2Q13087 525 aaKnown RBP0.65□□□□□ -2.31
FOXN3-216ENST00000557496 PIGHQ14442 188 aaPredicted RBP0.65□□□□□ -2.31
FOXN3-216ENST00000557496 SLC25A52Q3SY17 297 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 TP53I3Q53FA7 332 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 KIAA1328Q86T90 577 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 LINC01560Q8TB33 94 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 C17orf50Q8WW18 174 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 SLC13A3Q8WWT9 602 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 TM4SF18Q96CE8 201 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 CAMK2N2Q96S95 79 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 RUFY1Q96T51 708 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 GABARAPL3Q9BY60 117 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 RBKSQ9H477 322 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 UGT1A7Q9HAW7 530 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 UGT1A10Q9HAW8 530 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 UGT1A8Q9HAW9 530 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 ARGLU1Q9NWB6 273 aaPredicted RBP0.65□□□□□ -2.31
FOXN3-216ENST00000557496 HOXC10Q9NYD6 342 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 GNG12Q9UBI6 72 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 FETUBQ9UGM5 382 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 ZSWIM8A7E2V4 1837 aa0.65□□□□□ -2.31
FOXN3-216ENST00000557496 FANCIQ9NVI1 1328 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 ADAMTS13Q76LX8 1427 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 CIB4A0PJX0 185 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 NPIPA7E9PJI5 369 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 UBXN8O00124 270 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 RHOBTB1O94844 696 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 GABARAPO95166 117 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 CD74P04233 296 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 PRB1P04280 392 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 ARL14EPLP0DKL9 152 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 NPIPA8P0DM63 369 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 DDOSTP39656 456 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 TDO2P48775 406 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 PLA2G16P53816 162 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 HSF2Q03933 536 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 POU2AF1Q16633 256 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 CARD16Q5EG05 197 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 TPGS2Q68CL5 300 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 PGAP1Q75T13 922 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 MREGQ8N565 214 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 CLDN19Q8N6F1 224 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 OR52B4Q8NGK2 314 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 SYNDIG1Q9H7V2 258 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 UBE2ZQ9H832 354 aaPredicted RBP0.64□□□□□ -2.31
FOXN3-216ENST00000557496 VAT1LQ9HCJ6 419 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 ISYNA1Q9NPH2 558 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 ATXN10Q9UBB4 475 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 MTRRQ9UBK8 725 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 NPIPA1Q9UND3 350 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 CEMIPQ8WUJ3 1361 aa0.64□□□□□ -2.31
FOXN3-216ENST00000557496 SOCS1O15524 211 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 TAPBPO15533 448 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 PFKFB2O60825 505 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 KERAO60938 352 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 VPS26AO75436 327 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 BCAS2O75934 225 aaPredicted RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 OR4F21O95013 312 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 LRATO95237 230 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 IGHDP01880 384 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CCDC192P0DO97 292 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms