RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ST3GAL3Q11203 375 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 DGCR6Q14129 220 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 LY6DQ14210 128 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 KPNB1Q14974 876 aaKnown RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 OR1Q1Q15612 314 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 INPP5JQ15735 1006 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 IQCCQ4KMZ1 466 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 CMPK2Q5EBM0 449 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 KHDC1LQ5JSQ8 128 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ENTPD8Q5MY95 495 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ARHGAP11AQ6P4F7 1023 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ARSKQ6UWY0 536 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM108Q6UXF1 575 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 PLEKHM3Q6ZWE6 761 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 TRILQ7L0X0 811 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZDHHC21Q8IVQ6 265 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 OFCC1Q8IZS5 231 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 FAM83FQ8NEG4 500 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 OR4D11Q8NGI4 311 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 OR14L1PQ8NHC6 308 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF563Q8TA94 476 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 VANGL1Q8TAA9 524 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 NEIL3Q8TAT5 605 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ADAMTS16Q8TE57 1224 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 CANT1Q8WVQ1 401 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 FAR1Q8WVX9 515 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 SLC38A4Q969I6 547 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 SARAFQ96BY9 339 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 HS6ST2Q96MM7 605 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 GPR137Q96N19 417 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF300Q96RE9 604 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 MCHR1Q99705 422 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 SLX1AQ9BQ83 275 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM43Q9BTV4 400 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF426Q9BUY5 554 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 CHID1Q9BWS9 393 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 DENND2DQ9H6A0 471 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 NMNAT1Q9HAN9 279 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 SERINC1Q9NRX5 453 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 RPS6KB2Q9UBS0 482 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 CHRNA9Q9UGM1 479 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 RIMS3Q9UJD0 308 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 AP4S1Q9Y587 144 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 AP4B1Q9Y6B7 739 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 SPTA1P02549 2419 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 A0A087WUJ7 227 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TRGV5A0A0B4J1U4 118 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OR2M5A3KFT3 312 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 A8MVM7 634 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 FFAR1O14842 300 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 BCKDKO14874 412 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 FRS3O43559 492 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 FKBP6O75344 327 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 LYPD3O95274 346 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 H1F0P07305 194 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 HOXD4P09016 255 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 CPN1P15169 458 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TNFRSF1BP20333 461 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 CXCR1P25024 350 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TACR3P29371 465 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 RFC3P40938 356 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 CDH12P55289 794 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TAS2R41P59536 307 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 VLDLRP98155 873 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 HOXC5Q00444 222 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 PMP22Q01453 160 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 MERTKQ12866 999 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 FOXF1Q12946 379 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SELENBP1Q13228 472 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TRAM2Q15035 370 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TOMM20Q15388 145 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SF3B4Q15427 424 aaKnown RBP eCLIP5.14□□□□□ -1.598e-9■■■□□ 16.8
SCAF11-213ENST00000550629 TOMM34Q15785 309 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 ALG10BQ5I7T1 473 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 RAET1LQ5VY80 246 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OR2T5Q6IEZ7 315 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 C3orf33Q6P1S2 294 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 DEF8Q6ZN54 512 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TSEN54Q7Z6J9 526 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 AMIGO2Q86SJ2 522 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 YRDCQ86U90 279 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 RBM45Q8IUH3 476 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 LACC1Q8IV20 430 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 PM20D2Q8IYS1 436 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 RNF113BQ8IZP6 322 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 GHDCQ8N2G8 530 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 CADM2Q8N3J6 435 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 LINC00471Q8N535 108 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OR10Q1Q8NGQ4 319 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OR2T29Q8NH02 315 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OR6S1Q8NH40 331 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 STMN2Q93045 179 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SLCO4A1Q96BD0 722 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 C3orf49Q96BT1 292 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 DDIT4LQ96D03 193 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SNRNP40Q96DI7 357 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SLC41A3Q96GZ6 507 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SFXN2Q96NB2 322 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 SEPHS2Q99611 448 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 EPYCQ99645 322 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms