RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ZNF587Q96SQ5 575 aaPredicted RBP14.11□□□□□ -0.15
DDX55-212ENST00000544738 CGREF1Q99674 301 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 KATNB1Q9BVA0 655 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 B3GAT1Q9P2W7 334 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 PKD1L1Q8TDX9 2849 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 IGKV1D-42A0A075B6H8 117 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 A0A0B4J2E0 115 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 A0A1B0GX12 115 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 FMO6PO60774 539 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 EDF1O60869 148 aaKnown RBP14.1□□□□□ -0.15
DDX55-212ENST00000544738 NQO1P15559 274 aaKnown RBP14.1□□□□□ -0.15
DDX55-212ENST00000544738 IL1RL1Q01638 556 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 OR1Q1Q15612 314 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 CYP51A1Q16850 503 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 LINGO2Q7L985 606 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 SLC30A8Q8IWU4 369 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 CCDC36Q8IYA8 594 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.1□□□□□ -0.15
DDX55-212ENST00000544738 SCAIQ8N9R8 606 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 SLC41A3Q96GZ6 507 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 PRR14Q9BWN1 585 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 ASPNQ9BXN1 380 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 KLHL14Q9P2G3 628 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 SEC14L4Q9UDX3 406 aa14.1□□□□□ -0.15
DDX55-212ENST00000544738 IGHV1-18A0A0C4DH31 117 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 ITGA2P17301 1181 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 EFNA4P52798 201 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 PCBP3P57721 371 aaKnown RBP14.09□□□□□ -0.15
DDX55-212ENST00000544738 ARF1P84077 181 aaKnown RBP14.09□□□□□ -0.15
DDX55-212ENST00000544738 PTOV1Q86YD1 416 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 UEVLDQ8IX04 471 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 RFLNBQ8N5W9 214 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 C10orf105Q8TEF2 133 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 PROX1Q92786 737 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 THOC1Q96FV9 657 aaKnown RBP14.09□□□□□ -0.15
DDX55-212ENST00000544738 OR2M2Q96R28 347 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 TMEM43Q9BTV4 400 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 CRLF2Q9HC73 371 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 GPR35Q9HC97 309 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 MRGBPQ9NV56 204 aa14.09□□□□□ -0.15
DDX55-212ENST00000544738 CRNNQ9UBG3 495 aaPredicted RBP14.09□□□□□ -0.15
DDX55-212ENST00000544738 A0A096LPE4 126 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 A0A0G2JND7 137 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 A0A1W2PPZ6 126 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 MS4A18H0YCH9 400 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 M0QX08 132 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 TRAF3IP2O43734 574 aaPredicted RBP14.08□□□□□ -0.16
DDX55-212ENST00000544738 BGLAPP02818 100 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 CSF3P09919 207 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 CBLP22681 906 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 CDH12P55289 794 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 PMS2P3Q13401 168 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 NFYCQ13952 458 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 CEACAM16Q2WEN9 425 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 MS4A18Q3C1V0 323 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 INTS11Q5TA45 600 aaKnown RBP14.08□□□□□ -0.16
DDX55-212ENST00000544738 ZNF613Q6PF04 617 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 PATL1Q86TB9 770 aaKnown RBP14.08□□□□□ -0.16
DDX55-212ENST00000544738 RETREG3Q86VR2 466 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 OR4F15Q8NGB8 312 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 MSI2Q96DH6 328 aaKnown RBP14.08□□□□□ -0.16
DDX55-212ENST00000544738 LRR1Q96L50 414 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 MCHR1Q99705 422 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 B3GAT2Q9NPZ5 323 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 NOX1Q9Y5S8 564 aa14.08□□□□□ -0.16
DDX55-212ENST00000544738 VSTM5A8MXK1 200 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 TPST2O60704 377 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 PDE5AO76074 875 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 MT-ATP6P00846 226 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 IGKV3-15P01624 115 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 IGLV1-44P01699 117 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 VIMP08670 466 aaKnown RBP14.07□□□□□ -0.16
DDX55-212ENST00000544738 H2AFXP16104 143 aaPredicted RBP14.07□□□□□ -0.16
DDX55-212ENST00000544738 CBR1P16152 277 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 ARR3P36575 388 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 SERPINF1P36955 418 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 MTPNP58546 118 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 NAAAQ02083 359 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 PUDPQ08623 228 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 GGTLC2Q14390 218 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 DUSP7Q16829 419 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 SWI5Q1ZZU3 235 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 SNX32Q86XE0 403 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 TMEM123Q8N131 208 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 C10orf53Q8N6V4 93 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 SGMS2Q8NHU3 365 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 SLC26A7Q8TE54 656 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 RASSF5Q8WWW0 418 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 FBXO17Q96EF6 278 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 ARHGDIGQ99819 225 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 NELFAQ9H3P2 528 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 KAT8Q9H7Z6 458 aaKnown RBP14.07□□□□□ -0.16
DDX55-212ENST00000544738 CA10Q9NS85 328 aa14.07□□□□□ -0.16
DDX55-212ENST00000544738 MRPL39Q9NYK5 338 aaKnown RBP14.07□□□□□ -0.16
DDX55-212ENST00000544738 FBXO9Q9UK97 447 aaPredicted RBP14.07□□□□□ -0.16
DDX55-212ENST00000544738 ZNF99A8MXY4 864 aaPredicted RBP14.06□□□□□ -0.16
DDX55-212ENST00000544738 B9A039 149 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms