RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SS18L1O75177 396 aaPredicted RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 VAMP5O95183 116 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 YES1P07947 543 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 IFNGR1P15260 489 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 GSTM3P21266 225 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 NTF4P34130 210 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 KIR2DL2P43627 348 aaPredicted RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 SLC16A1P53985 500 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 BIDP55957 195 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 PRPS1P60891 318 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 SLC34A1Q06495 639 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 POU4F3Q15319 338 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 SLC36A3Q495N2 470 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 CARD17Q5XLA6 110 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 KDM4DQ6B0I6 523 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 NIPAL3Q6P499 406 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 ZBTB49Q6ZSB9 765 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 GALNT4Q8N4A0 578 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 IQCF1Q8N6M8 205 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 ZIC4Q8N9L1 334 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 ANKK1Q8NFD2 765 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 MAGEE2Q8TD90 523 aaPredicted RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 TSPAN32Q96QS1 320 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 RBM4BQ9BQ04 359 aaKnown RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 KATNB1Q9BVA0 655 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 IFT27Q9BW83 186 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 SF3B5Q9BWJ5 86 aaKnown RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 TSSK6Q9BXA6 273 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 OSBPL10Q9BXB5 764 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 POLDIP3Q9BY77 421 aaKnown RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 BCO1Q9HAY6 547 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
CD44-224ENST00000526669 EMC3Q9P0I2 261 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 POFUT2Q9Y2G5 429 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
CD44-224ENST00000526669 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 GPR171O14626 319 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 OSMP13725 252 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 BMP5P22003 454 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 CTSSP25774 331 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 SLC6A6P31641 620 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 SELENOPP49908 381 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 PPP2R2BQ00005 443 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 CAMK2DQ13557 499 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 PDK3Q15120 406 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 GUSBP1Q15486 140 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 ACKR1Q16570 336 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 RFX4Q33E94 735 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 ZIK1Q3SY52 487 aaPredicted RBP12.17□□□□□ -0.46
CD44-224ENST00000526669 ANKDD1AQ495B1 522 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 FBXW10Q5XX13 1052 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 BTLAQ7Z6A9 289 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 OR52L1Q8NGH7 329 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 RASD2Q96D21 266 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 Q96M85 177 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 ZFP3Q96NJ6 502 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 NDEL1Q9GZM8 345 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 GLRX2Q9NS18 164 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
CD44-224ENST00000526669 ZNF346Q9UL40 294 aaKnown RBP12.17□□□□□ -0.46
CD44-224ENST00000526669 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
CD44-224ENST00000526669 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 TEX13CA0A0J9YWL9 993 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 FAM90A27PA6NNH2 459 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 H7C1C5 153 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
CD44-224ENST00000526669 TNFSF13O75888 250 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 SMNDC1O75940 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
CD44-224ENST00000526669 BCL10O95999 233 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 IGHV3-9P01782 118 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 ALPLP05186 524 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 CD14P08571 375 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 ACVR1BP36896 505 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 ALDH3A2P51648 485 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
CD44-224ENST00000526669 LCN6P62502 163 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 COX10Q12887 443 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 RIPK1Q13546 671 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 TAF11Q15544 211 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 HSPB2Q16082 182 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 OGFRL1Q5TC84 451 aaPredicted RBP12.16□□□□□ -0.46
CD44-224ENST00000526669 TMEM236Q5W0B7 351 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 CD300LDQ6UXZ3 194 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 NHLRC1Q6VVB1 395 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 LIX1LQ8IVB5 337 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 OR4Q3Q8NH05 313 aa12.16□□□□□ -0.46
CD44-224ENST00000526669 NRG4Q8WWG1 115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms