RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ZNF407Q9C0G0 2248 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 ADGRL1O94910 1474 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 IGKV2-24A0A0C4DH68 120 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 IGHV5-10-1A0A0J9YXX1 117 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF850A8MQ14 1090 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 RAD51BO15315 384 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CHADO15335 359 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ZSCAN12O43309 604 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SCGB2A1O75556 95 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CDRT1O95170 752 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 AP2A1O95782 977 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 C1GALT1C1LP0DN25 315 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CALCBP10092 127 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 BTCP35070 178 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 YBEYP58557 167 aaPredicted RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 GMFBP60983 142 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ESRRGP62508 458 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 PITPNAQ00169 270 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ACVR1Q04771 509 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 REG3AQ06141 175 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SYCNQ0VAF6 134 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF816Q0VGE8 651 aaPredicted RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SLC39A6Q13433 755 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 FZD2Q14332 565 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CEBPEQ15744 281 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 TP53I3Q53FA7 332 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF684Q5T5D7 378 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 C1QTNF12Q5T7M4 302 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 HES5Q5TA89 166 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 OR2G6Q5TZ20 316 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM225Q6GV28 225 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 LINC00336Q6ZUF6 198 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 UTS2BQ765I0 119 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 WDR86Q86TI4 376 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 TRIM69Q86WT6 500 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 RIMKLAQ8IXN7 391 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CENPLQ8N0S6 344 aaPredicted RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 OSR2Q8N2R0 312 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 MREGQ8N565 214 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SYT14Q8NB59 555 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 GEMIN6Q8WXD5 167 aaKnown RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 FAM3CQ92520 227 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 FGF14Q92915 247 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 FOXC2Q99958 501 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 OMDQ99983 421 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF717Q9BY31 904 aaPredicted RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM117Q9H0C3 514 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 PARP12Q9H0J9 701 aaKnown RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 RNF167Q9H6Y7 350 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 NHEJ1Q9H9Q4 299 aaPredicted RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 ISYNA1Q9NPH2 558 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SAMSN1Q9NSI8 373 aaKnown RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 GPATCH2LQ9NWQ4 482 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 THUMPD1Q9NXG2 353 aaKnown RBP0.76□□□□□ -2.29
CCDC93-209ENST00000488908 GIN1Q9NXP7 522 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 CALYQ9NYX4 217 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 IL36GQ9NZH8 169 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 SPATA7Q9P0W8 599 aa0.76□□□□□ -2.29
CCDC93-209ENST00000488908 LTBP4Q8N2S1 1624 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 IGHV3-74A0A0B4J1X5 117 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 A8MXQ7 604 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 C16orf90A8MZG2 172 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 F8WDY8 70 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 H0YHG0 523 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CCER2I3L3R5 266 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CLDN3O15551 220 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 LANCL1O43813 399 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CHST1O43916 411 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SEC22BO75396 215 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 MBD3O95983 291 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 GAPDHP04406 335 aaKnown RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 PRPS2P11908 318 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CCDC130P13994 396 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 STMN1P16949 149 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 GCAP28676 217 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 DDOSTP39656 456 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 P2RY1P47900 373 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CRYBB1P53674 252 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 ARG2P78540 354 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SLC7A9P82251 487 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 FLI1Q01543 452 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 PJVKQ0ZLH3 352 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SCGB2A2Q13296 93 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 VGLL4Q14135 290 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 PIGHQ14442 188 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 GINS1Q14691 196 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 OXA1LQ15070 435 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SLC15A2Q16348 729 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 TPD52L1Q16890 204 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 FAM78AQ5JUQ0 283 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 BLOC1S2Q6QNY1 142 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 ABHD13Q7L211 337 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 STRADAQ7RTN6 431 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SNX32Q86XE0 403 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF679Q8IYX0 411 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 LGI3Q8N145 548 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 ACOT4Q8N9L9 421 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 NECAP1Q8NC96 275 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CNNM3Q8NE01 707 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CATSPER1Q8NEC5 780 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms